Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav18A0A075B656 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav18A0A075B656 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
Trav18A0A075B656 Gm44775-201ENSMUST00000207266 1456 ntBASIC10.26□□□□□ -0.77
Trav18A0A075B656 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC10.26□□□□□ -0.77
Trav18A0A075B656 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC10.26□□□□□ -0.77
Trav18A0A075B656 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC10.26□□□□□ -0.77
Trav18A0A075B656 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav18A0A075B656 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav18A0A075B656 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav18A0A075B656 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav18A0A075B656 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav18A0A075B656 Gm2824-203ENSMUST00000226189 1228 ntBASIC10.26□□□□□ -0.77
Trav18A0A075B656 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav18A0A075B656 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav18A0A075B656 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav18A0A075B656 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.26□□□□□ -0.77
Trav18A0A075B656 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Trav18A0A075B656 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav18A0A075B656 Gm13050-201ENSMUST00000122149 1345 ntBASIC10.26□□□□□ -0.77
Trav18A0A075B656 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC10.26□□□□□ -0.77
Trav18A0A075B656 Gm4735-201ENSMUST00000138679 1302 ntBASIC10.26□□□□□ -0.77
Trav18A0A075B656 Gm5855-201ENSMUST00000200240 1305 ntBASIC10.26□□□□□ -0.77
Trav18A0A075B656 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC10.26□□□□□ -0.77
Trav18A0A075B656 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav18A0A075B656 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav18A0A075B656 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC10.26□□□□□ -0.77
Trav18A0A075B656 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Trav18A0A075B656 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
Trav18A0A075B656 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav18A0A075B656 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Trav18A0A075B656 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav18A0A075B656 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav18A0A075B656 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav18A0A075B656 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav18A0A075B656 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav18A0A075B656 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav18A0A075B656 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Trav18A0A075B656 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav18A0A075B656 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav18A0A075B656 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav18A0A075B656 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav18A0A075B656 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav18A0A075B656 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav18A0A075B656 Gm18227-201ENSMUST00000211082 1468 ntBASIC10.25□□□□□ -0.77
Trav18A0A075B656 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav18A0A075B656 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.25□□□□□ -0.77
Trav18A0A075B656 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav18A0A075B656 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.25□□□□□ -0.77
Trav18A0A075B656 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav18A0A075B656 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Trav18A0A075B656 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav18A0A075B656 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav18A0A075B656 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC10.25□□□□□ -0.77
Trav18A0A075B656 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav18A0A075B656 Gm12363-201ENSMUST00000122250 668 ntBASIC10.25□□□□□ -0.77
Trav18A0A075B656 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC10.25□□□□□ -0.77
Trav18A0A075B656 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav18A0A075B656 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav18A0A075B656 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
Trav18A0A075B656 Gm6244-201ENSMUST00000178732 841 ntBASIC10.25□□□□□ -0.77
Trav18A0A075B656 Gm24196-201ENSMUST00000179161 110 ntBASIC10.25□□□□□ -0.77
Trav18A0A075B656 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC10.25□□□□□ -0.77
Trav18A0A075B656 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC10.25□□□□□ -0.77
Trav18A0A075B656 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav18A0A075B656 AC154239.3-201ENSMUST00000226933 674 ntBASIC10.25□□□□□ -0.77
Trav18A0A075B656 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav18A0A075B656 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav18A0A075B656 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC10.25□□□□□ -0.77
Trav18A0A075B656 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav18A0A075B656 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav18A0A075B656 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC10.25□□□□□ -0.77
Trav18A0A075B656 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav18A0A075B656 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC10.25□□□□□ -0.77
Trav18A0A075B656 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav18A0A075B656 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav18A0A075B656 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav18A0A075B656 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10.25□□□□□ -0.77
Trav18A0A075B656 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav18A0A075B656 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Trav18A0A075B656 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav18A0A075B656 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.25□□□□□ -0.77
Trav18A0A075B656 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Trav18A0A075B656 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav18A0A075B656 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC10.24□□□□□ -0.77
Trav18A0A075B656 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Trav18A0A075B656 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav18A0A075B656 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav18A0A075B656 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav18A0A075B656 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav18A0A075B656 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav18A0A075B656 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav18A0A075B656 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav18A0A075B656 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav18A0A075B656 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Trav18A0A075B656 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav18A0A075B656 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC10.24□□□□□ -0.77
Trav18A0A075B656 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Trav18A0A075B656 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC10.24□□□□□ -0.77
Trav18A0A075B656 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms