Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5-4A0A075B652 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Trav5-4A0A075B652 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5-4A0A075B652 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5-4A0A075B652 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Trav5-4A0A075B652 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5-4A0A075B652 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5-4A0A075B652 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC10.53□□□□□ -0.72
Trav5-4A0A075B652 Gm17435-202ENSMUST00000212699 1998 ntBASIC10.53□□□□□ -0.72
Trav5-4A0A075B652 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Trav5-4A0A075B652 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5-4A0A075B652 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5-4A0A075B652 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5-4A0A075B652 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5-4A0A075B652 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC10.53□□□□□ -0.72
Trav5-4A0A075B652 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Trav5-4A0A075B652 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC10.53□□□□□ -0.72
Trav5-4A0A075B652 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5-4A0A075B652 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5-4A0A075B652 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Trav5-4A0A075B652 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC10.52□□□□□ -0.72
Trav5-4A0A075B652 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav5-4A0A075B652 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Trav5-4A0A075B652 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Trav5-4A0A075B652 Gm45532-201ENSMUST00000210342 3620 ntBASIC10.52□□□□□ -0.72
Trav5-4A0A075B652 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Trav5-4A0A075B652 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav5-4A0A075B652 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav5-4A0A075B652 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav5-4A0A075B652 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC10.52□□□□□ -0.73
Trav5-4A0A075B652 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC10.52□□□□□ -0.73
Trav5-4A0A075B652 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav5-4A0A075B652 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav5-4A0A075B652 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Trav5-4A0A075B652 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav5-4A0A075B652 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC10.52□□□□□ -0.73
Trav5-4A0A075B652 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav5-4A0A075B652 Gm13369-201ENSMUST00000119442 987 ntBASIC10.52□□□□□ -0.73
Trav5-4A0A075B652 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav5-4A0A075B652 Gm12960-201ENSMUST00000120017 1066 ntBASIC10.52□□□□□ -0.73
Trav5-4A0A075B652 Gm12138-201ENSMUST00000122180 951 ntBASIC10.52□□□□□ -0.73
Trav5-4A0A075B652 Gm10156-201ENSMUST00000122364 462 ntBASIC10.52□□□□□ -0.73
Trav5-4A0A075B652 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC10.52□□□□□ -0.73
Trav5-4A0A075B652 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav5-4A0A075B652 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav5-4A0A075B652 Gm6244-201ENSMUST00000178732 841 ntBASIC10.52□□□□□ -0.73
Trav5-4A0A075B652 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC10.52□□□□□ -0.73
Trav5-4A0A075B652 Ighv5-13-201ENSMUST00000193550 290 ntBASIC10.52□□□□□ -0.73
Trav5-4A0A075B652 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav5-4A0A075B652 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav5-4A0A075B652 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav5-4A0A075B652 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav5-4A0A075B652 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav5-4A0A075B652 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Trav5-4A0A075B652 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav5-4A0A075B652 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav5-4A0A075B652 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav5-4A0A075B652 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav5-4A0A075B652 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav5-4A0A075B652 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav5-4A0A075B652 AC154262.2-202ENSMUST00000225158 1331 ntBASIC10.52□□□□□ -0.73
Trav5-4A0A075B652 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Trav5-4A0A075B652 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav5-4A0A075B652 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC10.52□□□□□ -0.73
Trav5-4A0A075B652 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.52□□□□□ -0.73
Trav5-4A0A075B652 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Trav5-4A0A075B652 CT009713.10-201ENSMUST00000225013 1986 ntBASIC10.52□□□□□ -0.73
Trav5-4A0A075B652 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav5-4A0A075B652 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav5-4A0A075B652 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav5-4A0A075B652 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav5-4A0A075B652 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav5-4A0A075B652 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Gm11803-201ENSMUST00000119966 444 ntBASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Mir1894-201ENSMUST00000122802 81 ntBASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Gm26185-201ENSMUST00000157692 266 ntBASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms