Protein–RNA interactions for Protein: W4VSP6

Gm5538, MCG67716, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5538W4VSP6 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gm5538W4VSP6 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gm5538W4VSP6 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Gm5538W4VSP6 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Gm5538W4VSP6 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.37
Gm5538W4VSP6 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm5538W4VSP6 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Gm5538W4VSP6 Gm4986-201ENSMUST00000119731 549 ntBASIC12.77□□□□□ -0.37
Gm5538W4VSP6 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Gm5538W4VSP6 Gm45930-201ENSMUST00000221330 292 ntBASIC12.77□□□□□ -0.37
Gm5538W4VSP6 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Gm5538W4VSP6 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm5538W4VSP6 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm5538W4VSP6 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Gm5538W4VSP6 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Gm5538W4VSP6 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Gm5538W4VSP6 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm5538W4VSP6 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm5538W4VSP6 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm5538W4VSP6 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm5538W4VSP6 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm5538W4VSP6 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm5538W4VSP6 Matn2-203ENSMUST00000226766 3252 ntBASIC12.77□□□□□ -0.37
Gm5538W4VSP6 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm5538W4VSP6 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Gm5538W4VSP6 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm5538W4VSP6 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5538W4VSP6 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Gm5538W4VSP6 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.76□□□□□ -0.37
Gm5538W4VSP6 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Gm17420-201ENSMUST00000164753 153 ntBASIC12.76□□□□□ -0.37
Gm5538W4VSP6 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Gm9630-201ENSMUST00000178304 885 ntBASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Gm18304-201ENSMUST00000189162 546 ntBASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.76□□□□□ -0.37
Gm5538W4VSP6 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.75□□□□□ -0.37
Gm5538W4VSP6 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.75□□□□□ -0.37
Gm5538W4VSP6 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm5538W4VSP6 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm5538W4VSP6 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm5538W4VSP6 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm5538W4VSP6 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm5538W4VSP6 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Gm5538W4VSP6 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm5538W4VSP6 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm5538W4VSP6 Gm12314-201ENSMUST00000118104 538 ntBASIC12.75□□□□□ -0.37
Gm5538W4VSP6 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Gm5538W4VSP6 Gm13786-201ENSMUST00000122371 333 ntBASIC12.75□□□□□ -0.37
Gm5538W4VSP6 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gm5538W4VSP6 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gm5538W4VSP6 Gm23119-201ENSMUST00000158610 140 ntBASIC12.75□□□□□ -0.37
Gm5538W4VSP6 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gm5538W4VSP6 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms