Protein–RNA interactions for Protein: Q9Z262

Cldn6, Claudin-6, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn6Q9Z262 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cldn6Q9Z262 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cldn6Q9Z262 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cldn6Q9Z262 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cldn6Q9Z262 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Cldn6Q9Z262 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Cldn6Q9Z262 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.73□□□□□ -0.53
Cldn6Q9Z262 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cldn6Q9Z262 Gm11597-201ENSMUST00000121423 964 ntBASIC11.73□□□□□ -0.53
Cldn6Q9Z262 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cldn6Q9Z262 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.73□□□□□ -0.53
Cldn6Q9Z262 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cldn6Q9Z262 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Cldn6Q9Z262 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.73□□□□□ -0.53
Cldn6Q9Z262 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cldn6Q9Z262 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cldn6Q9Z262 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cldn6Q9Z262 Gm8018-201ENSMUST00000173536 789 ntBASIC11.73□□□□□ -0.53
Cldn6Q9Z262 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.73□□□□□ -0.53
Cldn6Q9Z262 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cldn6Q9Z262 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cldn6Q9Z262 Gm43433-201ENSMUST00000196573 481 ntBASIC11.73□□□□□ -0.53
Cldn6Q9Z262 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cldn6Q9Z262 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cldn6Q9Z262 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cldn6Q9Z262 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cldn6Q9Z262 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cldn6Q9Z262 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cldn6Q9Z262 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.73□□□□□ -0.53
Cldn6Q9Z262 Gm5781-201ENSMUST00000219792 443 ntBASIC11.73□□□□□ -0.53
Cldn6Q9Z262 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.73□□□□□ -0.53
Cldn6Q9Z262 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.73□□□□□ -0.53
Cldn6Q9Z262 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cldn6Q9Z262 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cldn6Q9Z262 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cldn6Q9Z262 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cldn6Q9Z262 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cldn6Q9Z262 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cldn6Q9Z262 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cldn6Q9Z262 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.73□□□□□ -0.53
Cldn6Q9Z262 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cldn6Q9Z262 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.73□□□□□ -0.53
Cldn6Q9Z262 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn6Q9Z262 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Cldn6Q9Z262 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn6Q9Z262 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn6Q9Z262 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn6Q9Z262 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn6Q9Z262 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn6Q9Z262 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Cldn6Q9Z262 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Cldn6Q9Z262 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn6Q9Z262 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn6Q9Z262 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn6Q9Z262 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.72□□□□□ -0.53
Cldn6Q9Z262 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn6Q9Z262 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn6Q9Z262 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn6Q9Z262 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn6Q9Z262 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn6Q9Z262 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn6Q9Z262 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Cldn6Q9Z262 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn6Q9Z262 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Cldn6Q9Z262 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn6Q9Z262 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.72□□□□□ -0.53
Cldn6Q9Z262 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.72□□□□□ -0.53
Cldn6Q9Z262 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.72□□□□□ -0.53
Cldn6Q9Z262 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.72□□□□□ -0.53
Cldn6Q9Z262 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn6Q9Z262 Gm9022-201ENSMUST00000182482 992 ntBASIC11.72□□□□□ -0.53
Cldn6Q9Z262 Gm19184-201ENSMUST00000196798 928 ntBASIC11.72□□□□□ -0.53
Cldn6Q9Z262 Gm44405-201ENSMUST00000198952 126 ntBASIC11.72□□□□□ -0.53
Cldn6Q9Z262 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn6Q9Z262 Gm45930-201ENSMUST00000221330 292 ntBASIC11.72□□□□□ -0.53
Cldn6Q9Z262 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn6Q9Z262 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn6Q9Z262 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn6Q9Z262 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn6Q9Z262 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn6Q9Z262 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn6Q9Z262 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Cldn6Q9Z262 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn6Q9Z262 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.72□□□□□ -0.53
Cldn6Q9Z262 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn6Q9Z262 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn6Q9Z262 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn6Q9Z262 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn6Q9Z262 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn6Q9Z262 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn6Q9Z262 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn6Q9Z262 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn6Q9Z262 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cldn6Q9Z262 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cldn6Q9Z262 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cldn6Q9Z262 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.71□□□□□ -0.53
Cldn6Q9Z262 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cldn6Q9Z262 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cldn6Q9Z262 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cldn6Q9Z262 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 303.5 ms