Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn8aQ9WTU3 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn8aQ9WTU3 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn8aQ9WTU3 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn8aQ9WTU3 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn8aQ9WTU3 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn8aQ9WTU3 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.54□□□□□ -0.4
Scn8aQ9WTU3 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.54□□□□□ -0.4
Scn8aQ9WTU3 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn8aQ9WTU3 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Scn8aQ9WTU3 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn8aQ9WTU3 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Scn8aQ9WTU3 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Scn8aQ9WTU3 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn8aQ9WTU3 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Scn8aQ9WTU3 Gm14644-201ENSMUST00000116671 647 ntBASIC12.53□□□□□ -0.4
Scn8aQ9WTU3 Gm14247-201ENSMUST00000120950 237 ntBASIC12.53□□□□□ -0.4
Scn8aQ9WTU3 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.53□□□□□ -0.4
Scn8aQ9WTU3 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.53□□□□□ -0.4
Scn8aQ9WTU3 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Scn8aQ9WTU3 Gm7003-201ENSMUST00000195089 312 ntBASIC12.53□□□□□ -0.4
Scn8aQ9WTU3 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.53□□□□□ -0.4
Scn8aQ9WTU3 Gm17812-201ENSMUST00000204935 318 ntBASIC12.53□□□□□ -0.4
Scn8aQ9WTU3 Gm45433-201ENSMUST00000209386 247 ntBASIC12.53□□□□□ -0.4
Scn8aQ9WTU3 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.53□□□□□ -0.4
Scn8aQ9WTU3 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn8aQ9WTU3 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn8aQ9WTU3 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Scn8aQ9WTU3 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Scn8aQ9WTU3 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Scn8aQ9WTU3 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn8aQ9WTU3 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn8aQ9WTU3 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Scn8aQ9WTU3 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Scn8aQ9WTU3 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Scn8aQ9WTU3 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn8aQ9WTU3 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
Scn8aQ9WTU3 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Scn8aQ9WTU3 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Scn8aQ9WTU3 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.52□□□□□ -0.4
Scn8aQ9WTU3 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.52□□□□□ -0.4
Scn8aQ9WTU3 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Scn8aQ9WTU3 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Scn8aQ9WTU3 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Scn8aQ9WTU3 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Scn8aQ9WTU3 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Scn8aQ9WTU3 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.52□□□□□ -0.4
Scn8aQ9WTU3 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Scn8aQ9WTU3 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Scn8aQ9WTU3 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Scn8aQ9WTU3 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Scn8aQ9WTU3 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Scn8aQ9WTU3 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Scn8aQ9WTU3 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Scn8aQ9WTU3 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.52□□□□□ -0.41
Scn8aQ9WTU3 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Scn8aQ9WTU3 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn8aQ9WTU3 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn8aQ9WTU3 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn8aQ9WTU3 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn8aQ9WTU3 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Scn8aQ9WTU3 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn8aQ9WTU3 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Scn8aQ9WTU3 Gm13996-201ENSMUST00000118456 430 ntBASIC12.52□□□□□ -0.41
Scn8aQ9WTU3 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Scn8aQ9WTU3 Gm12164-201ENSMUST00000121695 551 ntBASIC12.52□□□□□ -0.41
Scn8aQ9WTU3 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Scn8aQ9WTU3 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.52□□□□□ -0.41
Scn8aQ9WTU3 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Scn8aQ9WTU3 Gm27530-201ENSMUST00000184096 98 ntBASIC12.52□□□□□ -0.41
Scn8aQ9WTU3 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.52□□□□□ -0.41
Scn8aQ9WTU3 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn8aQ9WTU3 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn8aQ9WTU3 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn8aQ9WTU3 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Scn8aQ9WTU3 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn8aQ9WTU3 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Scn8aQ9WTU3 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn8aQ9WTU3 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Scn8aQ9WTU3 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Scn8aQ9WTU3 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn8aQ9WTU3 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn8aQ9WTU3 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn8aQ9WTU3 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Scn8aQ9WTU3 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn8aQ9WTU3 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Scn8aQ9WTU3 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn8aQ9WTU3 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Scn8aQ9WTU3 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Scn8aQ9WTU3 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Scn8aQ9WTU3 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Scn8aQ9WTU3 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn8aQ9WTU3 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Scn8aQ9WTU3 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.51□□□□□ -0.41
Scn8aQ9WTU3 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn8aQ9WTU3 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Scn8aQ9WTU3 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn8aQ9WTU3 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.51□□□□□ -0.41
Scn8aQ9WTU3 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Scn8aQ9WTU3 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms