Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.23□□□□□ -0.45
Col4a4Q9QZR9 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.23□□□□□ -0.45
Col4a4Q9QZR9 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a4Q9QZR9 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a4Q9QZR9 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Col4a4Q9QZR9 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a4Q9QZR9 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a4Q9QZR9 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a4Q9QZR9 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a4Q9QZR9 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a4Q9QZR9 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a4Q9QZR9 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.23□□□□□ -0.45
Col4a4Q9QZR9 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a4Q9QZR9 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a4Q9QZR9 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a4Q9QZR9 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a4Q9QZR9 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a4Q9QZR9 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a4Q9QZR9 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Col4a4Q9QZR9 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.23□□□□□ -0.45
Col4a4Q9QZR9 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a4Q9QZR9 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a4Q9QZR9 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a4Q9QZR9 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Col4a4Q9QZR9 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 Gm11783-201ENSMUST00000119549 885 ntBASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 Gm22379-201ENSMUST00000157480 131 ntBASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 Gm26982-201ENSMUST00000182250 1151 ntBASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 Gm37782-201ENSMUST00000194879 678 ntBASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 Gm43380-201ENSMUST00000200421 220 ntBASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 AC122346.3-201ENSMUST00000223983 306 ntBASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 Mir326-201ENSMUST00000083637 95 ntBASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 Gm6322-201ENSMUST00000118789 1004 ntBASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 Gm24809-201ENSMUST00000175318 271 ntBASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 Gm43969-201ENSMUST00000204833 535 ntBASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 Gm8436-201ENSMUST00000210152 1080 ntBASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 Gm5749-201ENSMUST00000210673 1090 ntBASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a4Q9QZR9 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
Col4a4Q9QZR9 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Col4a4Q9QZR9 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Col4a4Q9QZR9 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col4a4Q9QZR9 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Col4a4Q9QZR9 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col4a4Q9QZR9 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col4a4Q9QZR9 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Col4a4Q9QZR9 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col4a4Q9QZR9 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col4a4Q9QZR9 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col4a4Q9QZR9 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col4a4Q9QZR9 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Col4a4Q9QZR9 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col4a4Q9QZR9 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC12.21□□□□□ -0.45
Col4a4Q9QZR9 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col4a4Q9QZR9 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Col4a4Q9QZR9 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Col4a4Q9QZR9 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col4a4Q9QZR9 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.21□□□□□ -0.45
Col4a4Q9QZR9 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC12.21□□□□□ -0.45
Col4a4Q9QZR9 Gm44882-201ENSMUST00000205702 802 ntBASIC12.21□□□□□ -0.45
Col4a4Q9QZR9 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC12.21□□□□□ -0.45
Col4a4Q9QZR9 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms