Protein–RNA interactions for Protein: Q9JKF7

Mrpl39, 39S ribosomal protein L39, mitochondrial, mousemouse

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl39Q9JKF7 Gm24513-201ENSMUST00000174964 138 ntBASIC10.83□□□□□ -0.68
Mrpl39Q9JKF7 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Mrpl39Q9JKF7 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Mrpl39Q9JKF7 Gm27397-201ENSMUST00000184997 107 ntBASIC10.83□□□□□ -0.68
Mrpl39Q9JKF7 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC10.83□□□□□ -0.68
Mrpl39Q9JKF7 AC124732.2-201ENSMUST00000221977 316 ntBASIC10.83□□□□□ -0.68
Mrpl39Q9JKF7 AC238811.1-201ENSMUST00000225302 441 ntBASIC10.83□□□□□ -0.68
Mrpl39Q9JKF7 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Mrpl39Q9JKF7 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC10.83□□□□□ -0.68
Mrpl39Q9JKF7 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Mrpl39Q9JKF7 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC10.83□□□□□ -0.68
Mrpl39Q9JKF7 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Mrpl39Q9JKF7 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Mrpl39Q9JKF7 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Mrpl39Q9JKF7 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Mrpl39Q9JKF7 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Mrpl39Q9JKF7 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Mrpl39Q9JKF7 Gm45776-201ENSMUST00000212366 1522 ntBASIC10.83□□□□□ -0.68
Mrpl39Q9JKF7 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Mrpl39Q9JKF7 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Mrpl39Q9JKF7 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC10.83□□□□□ -0.68
Mrpl39Q9JKF7 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Mrpl39Q9JKF7 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Mrpl39Q9JKF7 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Mrpl39Q9JKF7 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.82□□□□□ -0.68
Mrpl39Q9JKF7 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Mrpl39Q9JKF7 Gm37648-201ENSMUST00000192072 2563 ntBASIC10.82□□□□□ -0.68
Mrpl39Q9JKF7 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Mrpl39Q9JKF7 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Mrpl39Q9JKF7 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Mrpl39Q9JKF7 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Mrpl39Q9JKF7 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Mrpl39Q9JKF7 Gm18630-201ENSMUST00000222109 1397 ntBASIC10.82□□□□□ -0.68
Mrpl39Q9JKF7 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC10.82□□□□□ -0.68
Mrpl39Q9JKF7 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Mrpl39Q9JKF7 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC10.82□□□□□ -0.68
Mrpl39Q9JKF7 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Mrpl39Q9JKF7 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Mrpl39Q9JKF7 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Mrpl39Q9JKF7 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Mrpl39Q9JKF7 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Mrpl39Q9JKF7 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Mrpl39Q9JKF7 Gm14822-201ENSMUST00000122247 291 ntBASIC10.82□□□□□ -0.68
Mrpl39Q9JKF7 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Mrpl39Q9JKF7 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Mrpl39Q9JKF7 Gm9522-201ENSMUST00000182394 926 ntBASIC10.82□□□□□ -0.68
Mrpl39Q9JKF7 Gm9061-201ENSMUST00000182707 1006 ntBASIC10.82□□□□□ -0.68
Mrpl39Q9JKF7 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC10.82□□□□□ -0.68
Mrpl39Q9JKF7 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC10.82□□□□□ -0.68
Mrpl39Q9JKF7 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC10.82□□□□□ -0.68
Mrpl39Q9JKF7 Gm18916-201ENSMUST00000198264 1246 ntBASIC10.82□□□□□ -0.68
Mrpl39Q9JKF7 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC10.82□□□□□ -0.68
Mrpl39Q9JKF7 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC10.82□□□□□ -0.68
Mrpl39Q9JKF7 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC10.82□□□□□ -0.68
Mrpl39Q9JKF7 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Mrpl39Q9JKF7 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Mrpl39Q9JKF7 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Mrpl39Q9JKF7 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Mrpl39Q9JKF7 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Mrpl39Q9JKF7 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Mrpl39Q9JKF7 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Mrpl39Q9JKF7 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Mrpl39Q9JKF7 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Mrpl39Q9JKF7 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC10.82□□□□□ -0.68
Mrpl39Q9JKF7 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Mrpl39Q9JKF7 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Mrpl39Q9JKF7 Gm18262-201ENSMUST00000222560 1946 ntBASIC10.82□□□□□ -0.68
Mrpl39Q9JKF7 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Mrpl39Q9JKF7 Fgf17-202ENSMUST00000227123 1336 ntBASIC10.82□□□□□ -0.68
Mrpl39Q9JKF7 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Mrpl39Q9JKF7 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Mrpl39Q9JKF7 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Mrpl39Q9JKF7 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Mrpl39Q9JKF7 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mrpl39Q9JKF7 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mrpl39Q9JKF7 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mrpl39Q9JKF7 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mrpl39Q9JKF7 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mrpl39Q9JKF7 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Mrpl39Q9JKF7 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mrpl39Q9JKF7 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mrpl39Q9JKF7 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mrpl39Q9JKF7 Gm10652-201ENSMUST00000199790 2622 ntBASIC10.81□□□□□ -0.68
Mrpl39Q9JKF7 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Mrpl39Q9JKF7 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Mrpl39Q9JKF7 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.81□□□□□ -0.68
Mrpl39Q9JKF7 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Mrpl39Q9JKF7 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mrpl39Q9JKF7 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC10.81□□□□□ -0.68
Mrpl39Q9JKF7 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mrpl39Q9JKF7 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC10.81□□□□□ -0.68
Mrpl39Q9JKF7 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC10.81□□□□□ -0.68
Mrpl39Q9JKF7 Gm12291-201ENSMUST00000121627 311 ntBASIC10.81□□□□□ -0.68
Mrpl39Q9JKF7 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC10.81□□□□□ -0.68
Mrpl39Q9JKF7 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Mrpl39Q9JKF7 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC10.81□□□□□ -0.68
Mrpl39Q9JKF7 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC10.81□□□□□ -0.68
Mrpl39Q9JKF7 Gm21854-201ENSMUST00000179901 471 ntBASIC10.81□□□□□ -0.68
Mrpl39Q9JKF7 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Mrpl39Q9JKF7 Gm38223-201ENSMUST00000194484 695 ntBASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms