Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.81□□□□□ -0.52
Trim39Q9ESN2 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim39Q9ESN2 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trim39Q9ESN2 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.81□□□□□ -0.52
Trim39Q9ESN2 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim39Q9ESN2 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim39Q9ESN2 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Trim39Q9ESN2 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim39Q9ESN2 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.81□□□□□ -0.52
Trim39Q9ESN2 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim39Q9ESN2 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trim39Q9ESN2 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Trim39Q9ESN2 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Trim39Q9ESN2 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim39Q9ESN2 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trim39Q9ESN2 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim39Q9ESN2 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.81□□□□□ -0.52
Trim39Q9ESN2 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim39Q9ESN2 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.81□□□□□ -0.52
Trim39Q9ESN2 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim39Q9ESN2 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim39Q9ESN2 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.8□□□□□ -0.52
Trim39Q9ESN2 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim39Q9ESN2 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim39Q9ESN2 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim39Q9ESN2 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim39Q9ESN2 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim39Q9ESN2 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Trim39Q9ESN2 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim39Q9ESN2 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim39Q9ESN2 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim39Q9ESN2 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim39Q9ESN2 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim39Q9ESN2 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trim39Q9ESN2 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.8□□□□□ -0.52
Trim39Q9ESN2 Gm16202-201ENSMUST00000117532 544 ntBASIC11.8□□□□□ -0.52
Trim39Q9ESN2 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim39Q9ESN2 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim39Q9ESN2 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim39Q9ESN2 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.8□□□□□ -0.52
Trim39Q9ESN2 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.8□□□□□ -0.52
Trim39Q9ESN2 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim39Q9ESN2 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.8□□□□□ -0.52
Trim39Q9ESN2 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.8□□□□□ -0.52
Trim39Q9ESN2 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.8□□□□□ -0.52
Trim39Q9ESN2 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim39Q9ESN2 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim39Q9ESN2 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim39Q9ESN2 Gm5356-201ENSMUST00000093326 615 ntBASIC11.8□□□□□ -0.52
Trim39Q9ESN2 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim39Q9ESN2 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim39Q9ESN2 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim39Q9ESN2 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim39Q9ESN2 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim39Q9ESN2 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim39Q9ESN2 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim39Q9ESN2 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim39Q9ESN2 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC11.8□□□□□ -0.52
Trim39Q9ESN2 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim39Q9ESN2 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trim39Q9ESN2 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trim39Q9ESN2 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.8□□□□□ -0.52
Trim39Q9ESN2 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim39Q9ESN2 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim39Q9ESN2 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim39Q9ESN2 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim39Q9ESN2 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim39Q9ESN2 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim39Q9ESN2 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim39Q9ESN2 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim39Q9ESN2 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim39Q9ESN2 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim39Q9ESN2 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim39Q9ESN2 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim39Q9ESN2 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.79□□□□□ -0.52
Trim39Q9ESN2 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim39Q9ESN2 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.79□□□□□ -0.52
Trim39Q9ESN2 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.79□□□□□ -0.52
Trim39Q9ESN2 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim39Q9ESN2 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Trim39Q9ESN2 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim39Q9ESN2 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim39Q9ESN2 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim39Q9ESN2 Gm16372-201ENSMUST00000073088 450 ntBASIC11.79□□□□□ -0.52
Trim39Q9ESN2 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim39Q9ESN2 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim39Q9ESN2 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim39Q9ESN2 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim39Q9ESN2 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim39Q9ESN2 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim39Q9ESN2 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim39Q9ESN2 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Trim39Q9ESN2 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim39Q9ESN2 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim39Q9ESN2 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim39Q9ESN2 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim39Q9ESN2 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trim39Q9ESN2 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.78□□□□□ -0.52
Trim39Q9ESN2 Gm37648-201ENSMUST00000192072 2563 ntBASIC11.78□□□□□ -0.52
Trim39Q9ESN2 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms