Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Tubb3Q9ERD7 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tubb3Q9ERD7 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tubb3Q9ERD7 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tubb3Q9ERD7 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tubb3Q9ERD7 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tubb3Q9ERD7 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tubb3Q9ERD7 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tubb3Q9ERD7 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Tubb3Q9ERD7 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Tubb3Q9ERD7 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.47□□□□□ -0.41
Tubb3Q9ERD7 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.47□□□□□ -0.41
Tubb3Q9ERD7 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tubb3Q9ERD7 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tubb3Q9ERD7 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Tubb3Q9ERD7 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Tubb3Q9ERD7 Gm8805-201ENSMUST00000117848 313 ntBASIC12.47□□□□□ -0.41
Tubb3Q9ERD7 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
Tubb3Q9ERD7 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.47□□□□□ -0.41
Tubb3Q9ERD7 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.41
Tubb3Q9ERD7 Gm25927-201ENSMUST00000175058 117 ntBASIC12.47□□□□□ -0.41
Tubb3Q9ERD7 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Tubb3Q9ERD7 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tubb3Q9ERD7 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.47□□□□□ -0.41
Tubb3Q9ERD7 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tubb3Q9ERD7 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Tubb3Q9ERD7 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tubb3Q9ERD7 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tubb3Q9ERD7 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tubb3Q9ERD7 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Tubb3Q9ERD7 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tubb3Q9ERD7 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.47□□□□□ -0.41
Tubb3Q9ERD7 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.47□□□□□ -0.41
Tubb3Q9ERD7 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tubb3Q9ERD7 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tubb3Q9ERD7 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tubb3Q9ERD7 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tubb3Q9ERD7 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tubb3Q9ERD7 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tubb3Q9ERD7 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Tubb3Q9ERD7 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tubb3Q9ERD7 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.46□□□□□ -0.41
Tubb3Q9ERD7 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tubb3Q9ERD7 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tubb3Q9ERD7 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tubb3Q9ERD7 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Tubb3Q9ERD7 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tubb3Q9ERD7 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Tubb3Q9ERD7 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tubb3Q9ERD7 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Tubb3Q9ERD7 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Tubb3Q9ERD7 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tubb3Q9ERD7 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tubb3Q9ERD7 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Tubb3Q9ERD7 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.41
Tubb3Q9ERD7 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Tubb3Q9ERD7 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tubb3Q9ERD7 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tubb3Q9ERD7 Gm22018-201ENSMUST00000104357 131 ntBASIC12.46□□□□□ -0.41
Tubb3Q9ERD7 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.46□□□□□ -0.41
Tubb3Q9ERD7 Gm16479-201ENSMUST00000121706 932 ntBASIC12.46□□□□□ -0.41
Tubb3Q9ERD7 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.46□□□□□ -0.41
Tubb3Q9ERD7 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tubb3Q9ERD7 Gm9630-201ENSMUST00000178304 885 ntBASIC12.46□□□□□ -0.41
Tubb3Q9ERD7 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.46□□□□□ -0.41
Tubb3Q9ERD7 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.46□□□□□ -0.41
Tubb3Q9ERD7 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.46□□□□□ -0.41
Tubb3Q9ERD7 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Tubb3Q9ERD7 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Tubb3Q9ERD7 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Tubb3Q9ERD7 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Tubb3Q9ERD7 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Tubb3Q9ERD7 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Tubb3Q9ERD7 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.46□□□□□ -0.42
Tubb3Q9ERD7 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Tubb3Q9ERD7 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Tubb3Q9ERD7 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Tubb3Q9ERD7 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Tubb3Q9ERD7 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Tubb3Q9ERD7 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tubb3Q9ERD7 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tubb3Q9ERD7 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Tubb3Q9ERD7 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tubb3Q9ERD7 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tubb3Q9ERD7 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tubb3Q9ERD7 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Tubb3Q9ERD7 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tubb3Q9ERD7 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tubb3Q9ERD7 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Tubb3Q9ERD7 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tubb3Q9ERD7 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.45□□□□□ -0.42
Tubb3Q9ERD7 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Tubb3Q9ERD7 Mir1247-201ENSMUST00000116706 82 ntBASIC12.45□□□□□ -0.42
Tubb3Q9ERD7 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.45□□□□□ -0.42
Tubb3Q9ERD7 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.45□□□□□ -0.42
Tubb3Q9ERD7 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.45□□□□□ -0.42
Tubb3Q9ERD7 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.45□□□□□ -0.42
Tubb3Q9ERD7 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Tubb3Q9ERD7 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Tubb3Q9ERD7 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms