Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Gm13047-201ENSMUST00000117116 815 ntBASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Gm22144-201ENSMUST00000157402 102 ntBASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Gm3671-201ENSMUST00000182463 1007 ntBASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Gm37028-201ENSMUST00000194276 107 ntBASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Gm44958-201ENSMUST00000203734 736 ntBASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Gm4157-201ENSMUST00000211647 679 ntBASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Gm3028-201ENSMUST00000213805 1119 ntBASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Gm9387-201ENSMUST00000098624 1320 ntBASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldnd1Q9CQX5 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Cldnd1Q9CQX5 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldnd1Q9CQX5 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldnd1Q9CQX5 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldnd1Q9CQX5 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldnd1Q9CQX5 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cldnd1Q9CQX5 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldnd1Q9CQX5 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Cldnd1Q9CQX5 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Cldnd1Q9CQX5 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldnd1Q9CQX5 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldnd1Q9CQX5 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldnd1Q9CQX5 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldnd1Q9CQX5 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldnd1Q9CQX5 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldnd1Q9CQX5 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Cldnd1Q9CQX5 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cldnd1Q9CQX5 Gm14724-201ENSMUST00000118400 537 ntBASIC12.78□□□□□ -0.36
Cldnd1Q9CQX5 Gm11956-201ENSMUST00000119525 512 ntBASIC12.78□□□□□ -0.36
Cldnd1Q9CQX5 Gm14585-201ENSMUST00000120713 634 ntBASIC12.78□□□□□ -0.36
Cldnd1Q9CQX5 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.78□□□□□ -0.36
Cldnd1Q9CQX5 Gm22138-201ENSMUST00000158748 128 ntBASIC12.78□□□□□ -0.36
Cldnd1Q9CQX5 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cldnd1Q9CQX5 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cldnd1Q9CQX5 Mir7076-201ENSMUST00000183519 74 ntBASIC12.78□□□□□ -0.36
Cldnd1Q9CQX5 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cldnd1Q9CQX5 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Cldnd1Q9CQX5 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.78□□□□□ -0.36
Cldnd1Q9CQX5 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC12.78□□□□□ -0.36
Cldnd1Q9CQX5 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC12.78□□□□□ -0.36
Cldnd1Q9CQX5 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.78□□□□□ -0.36
Cldnd1Q9CQX5 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldnd1Q9CQX5 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldnd1Q9CQX5 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldnd1Q9CQX5 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC12.78□□□□□ -0.36
Cldnd1Q9CQX5 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldnd1Q9CQX5 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldnd1Q9CQX5 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cldnd1Q9CQX5 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cldnd1Q9CQX5 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldnd1Q9CQX5 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldnd1Q9CQX5 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldnd1Q9CQX5 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldnd1Q9CQX5 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldnd1Q9CQX5 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldnd1Q9CQX5 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldnd1Q9CQX5 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldnd1Q9CQX5 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms