Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.93□□□□□ -0.34
Retreg3Q9CQV4 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retreg3Q9CQV4 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retreg3Q9CQV4 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC12.93□□□□□ -0.34
Retreg3Q9CQV4 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retreg3Q9CQV4 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Retreg3Q9CQV4 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.93□□□□□ -0.34
Retreg3Q9CQV4 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Retreg3Q9CQV4 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retreg3Q9CQV4 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.93□□□□□ -0.34
Retreg3Q9CQV4 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retreg3Q9CQV4 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.93□□□□□ -0.34
Retreg3Q9CQV4 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Retreg3Q9CQV4 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retreg3Q9CQV4 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retreg3Q9CQV4 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Retreg3Q9CQV4 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retreg3Q9CQV4 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Retreg3Q9CQV4 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.93□□□□□ -0.34
Retreg3Q9CQV4 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Retreg3Q9CQV4 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Retreg3Q9CQV4 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retreg3Q9CQV4 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.93□□□□□ -0.34
Retreg3Q9CQV4 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retreg3Q9CQV4 Gm37160-201ENSMUST00000193081 1689 ntBASIC12.93□□□□□ -0.34
Retreg3Q9CQV4 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retreg3Q9CQV4 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Retreg3Q9CQV4 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.92□□□□□ -0.34
Retreg3Q9CQV4 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retreg3Q9CQV4 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Retreg3Q9CQV4 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.92□□□□□ -0.34
Retreg3Q9CQV4 Gm38055-201ENSMUST00000195353 2217 ntBASIC12.92□□□□□ -0.34
Retreg3Q9CQV4 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Retreg3Q9CQV4 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retreg3Q9CQV4 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retreg3Q9CQV4 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retreg3Q9CQV4 Ifna13-201ENSMUST00000105149 819 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Retreg3Q9CQV4 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Retreg3Q9CQV4 Gm11835-201ENSMUST00000120635 663 ntBASIC12.92□□□□□ -0.34
Retreg3Q9CQV4 Gm13813-201ENSMUST00000120998 787 ntBASIC12.92□□□□□ -0.34
Retreg3Q9CQV4 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Retreg3Q9CQV4 Gm11948-201ENSMUST00000142322 539 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Retreg3Q9CQV4 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC12.92□□□□□ -0.34
Retreg3Q9CQV4 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Retreg3Q9CQV4 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retreg3Q9CQV4 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Retreg3Q9CQV4 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Retreg3Q9CQV4 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Retreg3Q9CQV4 Gm28064-201ENSMUST00000185639 858 ntBASIC12.92□□□□□ -0.34
Retreg3Q9CQV4 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC12.92□□□□□ -0.34
Retreg3Q9CQV4 Gm9931-201ENSMUST00000193584 1185 ntBASIC12.92□□□□□ -0.34
Retreg3Q9CQV4 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC12.92□□□□□ -0.34
Retreg3Q9CQV4 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.92□□□□□ -0.34
Retreg3Q9CQV4 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Retreg3Q9CQV4 Gm43997-201ENSMUST00000203986 1005 ntBASIC12.92□□□□□ -0.34
Retreg3Q9CQV4 Gm45733-201ENSMUST00000212988 437 ntBASIC12.92□□□□□ -0.34
Retreg3Q9CQV4 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.92□□□□□ -0.34
Retreg3Q9CQV4 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Retreg3Q9CQV4 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retreg3Q9CQV4 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retreg3Q9CQV4 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retreg3Q9CQV4 Cbx3-202ENSMUST00000094623 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retreg3Q9CQV4 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Retreg3Q9CQV4 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retreg3Q9CQV4 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retreg3Q9CQV4 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retreg3Q9CQV4 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.92□□□□□ -0.34
Retreg3Q9CQV4 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retreg3Q9CQV4 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC12.92□□□□□ -0.34
Retreg3Q9CQV4 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Retreg3Q9CQV4 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retreg3Q9CQV4 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retreg3Q9CQV4 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.92□□□□□ -0.34
Retreg3Q9CQV4 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC12.91□□□□□ -0.34
Retreg3Q9CQV4 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Retreg3Q9CQV4 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retreg3Q9CQV4 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Retreg3Q9CQV4 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retreg3Q9CQV4 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retreg3Q9CQV4 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Retreg3Q9CQV4 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retreg3Q9CQV4 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retreg3Q9CQV4 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.91□□□□□ -0.34
Retreg3Q9CQV4 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retreg3Q9CQV4 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retreg3Q9CQV4 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retreg3Q9CQV4 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Retreg3Q9CQV4 Gm23931-201ENSMUST00000103842 109 ntBASIC12.91□□□□□ -0.34
Retreg3Q9CQV4 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Retreg3Q9CQV4 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Retreg3Q9CQV4 Gm13924-201ENSMUST00000119899 486 ntBASIC12.91□□□□□ -0.34
Retreg3Q9CQV4 A330043C09Rik-201ENSMUST00000139823 1009 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Retreg3Q9CQV4 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC12.91□□□□□ -0.34
Retreg3Q9CQV4 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC12.91□□□□□ -0.34
Retreg3Q9CQV4 Gm38266-201ENSMUST00000194931 421 ntBASIC12.91□□□□□ -0.34
Retreg3Q9CQV4 Gm43894-201ENSMUST00000203274 688 ntBASIC12.91□□□□□ -0.34
Retreg3Q9CQV4 Gm17838-201ENSMUST00000205872 876 ntBASIC12.91□□□□□ -0.34
Retreg3Q9CQV4 Gm4768-201ENSMUST00000206199 686 ntBASIC12.91□□□□□ -0.34
Retreg3Q9CQV4 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Retreg3Q9CQV4 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms