Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.3□□□□□ -0.44
Trim8Q99PJ2 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.3□□□□□ -0.44
Trim8Q99PJ2 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim8Q99PJ2 Mir6392-201ENSMUST00000184924 108 ntBASIC12.3□□□□□ -0.44
Trim8Q99PJ2 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.3□□□□□ -0.44
Trim8Q99PJ2 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.3□□□□□ -0.44
Trim8Q99PJ2 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.3□□□□□ -0.44
Trim8Q99PJ2 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.3□□□□□ -0.44
Trim8Q99PJ2 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.3□□□□□ -0.44
Trim8Q99PJ2 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.3□□□□□ -0.44
Trim8Q99PJ2 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim8Q99PJ2 Gm15823-201ENSMUST00000064305 670 ntBASIC12.3□□□□□ -0.44
Trim8Q99PJ2 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim8Q99PJ2 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim8Q99PJ2 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trim8Q99PJ2 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trim8Q99PJ2 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim8Q99PJ2 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim8Q99PJ2 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim8Q99PJ2 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim8Q99PJ2 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim8Q99PJ2 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.3□□□□□ -0.44
Trim8Q99PJ2 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim8Q99PJ2 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim8Q99PJ2 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim8Q99PJ2 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.3□□□□□ -0.44
Trim8Q99PJ2 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim8Q99PJ2 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trim8Q99PJ2 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim8Q99PJ2 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim8Q99PJ2 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim8Q99PJ2 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim8Q99PJ2 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim8Q99PJ2 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim8Q99PJ2 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim8Q99PJ2 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim8Q99PJ2 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim8Q99PJ2 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim8Q99PJ2 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim8Q99PJ2 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim8Q99PJ2 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim8Q99PJ2 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Trim8Q99PJ2 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim8Q99PJ2 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim8Q99PJ2 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.29□□□□□ -0.44
Trim8Q99PJ2 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim8Q99PJ2 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim8Q99PJ2 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.29□□□□□ -0.44
Trim8Q99PJ2 Gm14704-201ENSMUST00000120300 874 ntBASIC12.29□□□□□ -0.44
Trim8Q99PJ2 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.29□□□□□ -0.44
Trim8Q99PJ2 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.29□□□□□ -0.44
Trim8Q99PJ2 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.29□□□□□ -0.44
Trim8Q99PJ2 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim8Q99PJ2 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim8Q99PJ2 Gm18018-201ENSMUST00000198273 408 ntBASIC12.29□□□□□ -0.44
Trim8Q99PJ2 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.29□□□□□ -0.44
Trim8Q99PJ2 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim8Q99PJ2 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.29□□□□□ -0.44
Trim8Q99PJ2 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.29□□□□□ -0.44
Trim8Q99PJ2 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim8Q99PJ2 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim8Q99PJ2 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim8Q99PJ2 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim8Q99PJ2 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim8Q99PJ2 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim8Q99PJ2 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim8Q99PJ2 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.29□□□□□ -0.44
Trim8Q99PJ2 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim8Q99PJ2 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim8Q99PJ2 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim8Q99PJ2 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim8Q99PJ2 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim8Q99PJ2 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim8Q99PJ2 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim8Q99PJ2 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim8Q99PJ2 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim8Q99PJ2 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.29□□□□□ -0.44
Trim8Q99PJ2 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trim8Q99PJ2 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trim8Q99PJ2 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim8Q99PJ2 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim8Q99PJ2 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim8Q99PJ2 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim8Q99PJ2 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim8Q99PJ2 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.28□□□□□ -0.44
Trim8Q99PJ2 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.28□□□□□ -0.44
Trim8Q99PJ2 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim8Q99PJ2 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim8Q99PJ2 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim8Q99PJ2 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim8Q99PJ2 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim8Q99PJ2 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim8Q99PJ2 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trim8Q99PJ2 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim8Q99PJ2 Gm8805-201ENSMUST00000117848 313 ntBASIC12.28□□□□□ -0.44
Trim8Q99PJ2 Gm13123-201ENSMUST00000122173 492 ntBASIC12.28□□□□□ -0.44
Trim8Q99PJ2 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim8Q99PJ2 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.28□□□□□ -0.44
Trim8Q99PJ2 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.28□□□□□ -0.44
Trim8Q99PJ2 Gm45668-201ENSMUST00000211271 493 ntBASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms