Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm19309-201ENSMUST00000218295 205 ntBASIC12.23□□□□□ -0.45
Msh4Q99MT2 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.23□□□□□ -0.45
Msh4Q99MT2 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.23□□□□□ -0.45
Msh4Q99MT2 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.23□□□□□ -0.45
Msh4Q99MT2 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.23□□□□□ -0.45
Msh4Q99MT2 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Msh4Q99MT2 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.23□□□□□ -0.45
Msh4Q99MT2 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Msh4Q99MT2 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Msh4Q99MT2 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Msh4Q99MT2 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Msh4Q99MT2 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Msh4Q99MT2 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Msh4Q99MT2 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Msh4Q99MT2 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Msh4Q99MT2 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Msh4Q99MT2 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Msh4Q99MT2 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Msh4Q99MT2 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Msh4Q99MT2 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Msh4Q99MT2 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Msh4Q99MT2 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Msh4Q99MT2 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Msh4Q99MT2 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Msh4Q99MT2 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Msh4Q99MT2 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Msh4Q99MT2 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.23□□□□□ -0.45
Msh4Q99MT2 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Msh4Q99MT2 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Msh4Q99MT2 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Msh4Q99MT2 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Msh4Q99MT2 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Msh4Q99MT2 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Msh4Q99MT2 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.22□□□□□ -0.45
Msh4Q99MT2 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.22□□□□□ -0.45
Msh4Q99MT2 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Msh4Q99MT2 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Msh4Q99MT2 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Msh4Q99MT2 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Msh4Q99MT2 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Msh4Q99MT2 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.22□□□□□ -0.45
Msh4Q99MT2 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.22□□□□□ -0.45
Msh4Q99MT2 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Msh4Q99MT2 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Msh4Q99MT2 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Msh4Q99MT2 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Msh4Q99MT2 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.22□□□□□ -0.45
Msh4Q99MT2 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.22□□□□□ -0.45
Msh4Q99MT2 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.22□□□□□ -0.45
Msh4Q99MT2 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Msh4Q99MT2 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.22□□□□□ -0.45
Msh4Q99MT2 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.22□□□□□ -0.45
Msh4Q99MT2 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Msh4Q99MT2 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.22□□□□□ -0.45
Msh4Q99MT2 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.22□□□□□ -0.45
Msh4Q99MT2 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Msh4Q99MT2 Gm45331-201ENSMUST00000209868 554 ntBASIC12.22□□□□□ -0.45
Msh4Q99MT2 Gm7399-201ENSMUST00000032395 858 ntBASIC12.22□□□□□ -0.45
Msh4Q99MT2 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Msh4Q99MT2 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Msh4Q99MT2 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Msh4Q99MT2 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.22□□□□□ -0.45
Msh4Q99MT2 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Msh4Q99MT2 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Msh4Q99MT2 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Msh4Q99MT2 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Msh4Q99MT2 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Msh4Q99MT2 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Msh4Q99MT2 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Msh4Q99MT2 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.22□□□□□ -0.45
Msh4Q99MT2 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Msh4Q99MT2 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Msh4Q99MT2 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Msh4Q99MT2 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.22□□□□□ -0.45
Msh4Q99MT2 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Msh4Q99MT2 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Msh4Q99MT2 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.21□□□□□ -0.45
Msh4Q99MT2 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.21□□□□□ -0.45
Msh4Q99MT2 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Msh4Q99MT2 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Msh4Q99MT2 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Msh4Q99MT2 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Msh4Q99MT2 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.21□□□□□ -0.45
Msh4Q99MT2 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Msh4Q99MT2 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Msh4Q99MT2 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.21□□□□□ -0.45
Msh4Q99MT2 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Msh4Q99MT2 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Msh4Q99MT2 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Msh4Q99MT2 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Msh4Q99MT2 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Msh4Q99MT2 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.21□□□□□ -0.45
Msh4Q99MT2 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Msh4Q99MT2 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.21□□□□□ -0.45
Msh4Q99MT2 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Msh4Q99MT2 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Msh4Q99MT2 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Msh4Q99MT2 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.21□□□□□ -0.45
Msh4Q99MT2 Gm11591-201ENSMUST00000120063 702 ntBASIC12.21□□□□□ -0.45
Msh4Q99MT2 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms