Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Gm4984-201ENSMUST00000115987 360 ntBASIC12.17□□□□□ -0.46
Rnf111Q99ML9 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.17□□□□□ -0.46
Rnf111Q99ML9 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf111Q99ML9 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.17□□□□□ -0.46
Rnf111Q99ML9 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.17□□□□□ -0.46
Rnf111Q99ML9 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf111Q99ML9 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf111Q99ML9 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf111Q99ML9 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf111Q99ML9 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf111Q99ML9 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf111Q99ML9 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf111Q99ML9 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf111Q99ML9 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Rnf111Q99ML9 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf111Q99ML9 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf111Q99ML9 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf111Q99ML9 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf111Q99ML9 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf111Q99ML9 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf111Q99ML9 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf111Q99ML9 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Rnf111Q99ML9 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.17□□□□□ -0.46
Rnf111Q99ML9 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf111Q99ML9 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Rnf111Q99ML9 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.17□□□□□ -0.46
Rnf111Q99ML9 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf111Q99ML9 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Rnf111Q99ML9 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf111Q99ML9 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Rnf111Q99ML9 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf111Q99ML9 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Rnf111Q99ML9 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf111Q99ML9 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf111Q99ML9 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf111Q99ML9 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf111Q99ML9 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Rnf111Q99ML9 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf111Q99ML9 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.16□□□□□ -0.46
Rnf111Q99ML9 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf111Q99ML9 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf111Q99ML9 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.16□□□□□ -0.46
Rnf111Q99ML9 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Rnf111Q99ML9 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf111Q99ML9 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf111Q99ML9 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf111Q99ML9 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.16□□□□□ -0.46
Rnf111Q99ML9 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.16□□□□□ -0.46
Rnf111Q99ML9 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf111Q99ML9 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf111Q99ML9 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.16□□□□□ -0.46
Rnf111Q99ML9 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.16□□□□□ -0.46
Rnf111Q99ML9 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf111Q99ML9 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.16□□□□□ -0.46
Rnf111Q99ML9 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.16□□□□□ -0.46
Rnf111Q99ML9 Gm27331-201ENSMUST00000183705 60 ntBASIC12.16□□□□□ -0.46
Rnf111Q99ML9 Gm37497-201ENSMUST00000195830 798 ntBASIC12.16□□□□□ -0.46
Rnf111Q99ML9 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.16□□□□□ -0.46
Rnf111Q99ML9 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.16□□□□□ -0.46
Rnf111Q99ML9 Gm7561-201ENSMUST00000211203 886 ntBASIC12.16□□□□□ -0.46
Rnf111Q99ML9 Gm29705-201ENSMUST00000212598 474 ntBASIC12.16□□□□□ -0.46
Rnf111Q99ML9 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf111Q99ML9 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf111Q99ML9 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf111Q99ML9 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf111Q99ML9 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf111Q99ML9 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Rnf111Q99ML9 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf111Q99ML9 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf111Q99ML9 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf111Q99ML9 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf111Q99ML9 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.15□□□□□ -0.46
Rnf111Q99ML9 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.15□□□□□ -0.46
Rnf111Q99ML9 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf111Q99ML9 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.15□□□□□ -0.46
Rnf111Q99ML9 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf111Q99ML9 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf111Q99ML9 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.15□□□□□ -0.46
Rnf111Q99ML9 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.15□□□□□ -0.46
Rnf111Q99ML9 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf111Q99ML9 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf111Q99ML9 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf111Q99ML9 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf111Q99ML9 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf111Q99ML9 Gm16479-201ENSMUST00000121706 932 ntBASIC12.15□□□□□ -0.46
Rnf111Q99ML9 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.15□□□□□ -0.46
Rnf111Q99ML9 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf111Q99ML9 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.15□□□□□ -0.46
Rnf111Q99ML9 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.15□□□□□ -0.46
Rnf111Q99ML9 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.15□□□□□ -0.46
Rnf111Q99ML9 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf111Q99ML9 Gm44882-201ENSMUST00000205702 802 ntBASIC12.15□□□□□ -0.46
Rnf111Q99ML9 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf111Q99ML9 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.15□□□□□ -0.46
Rnf111Q99ML9 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf111Q99ML9 Gm10146-201ENSMUST00000072739 309 ntBASIC12.15□□□□□ -0.46
Rnf111Q99ML9 Gm26035-201ENSMUST00000083065 308 ntBASIC12.15□□□□□ -0.46
Rnf111Q99ML9 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf111Q99ML9 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf111Q99ML9 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms