Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk5rap3Q99LM2 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Cdk5rap3Q99LM2 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Cdk5rap3Q99LM2 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Cdk5rap3Q99LM2 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.99□□□□□ -0.33
Cdk5rap3Q99LM2 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Cdk5rap3Q99LM2 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk5rap3Q99LM2 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk5rap3Q99LM2 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk5rap3Q99LM2 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk5rap3Q99LM2 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk5rap3Q99LM2 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Cdk5rap3Q99LM2 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk5rap3Q99LM2 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk5rap3Q99LM2 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.99□□□□□ -0.33
Cdk5rap3Q99LM2 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.99□□□□□ -0.33
Cdk5rap3Q99LM2 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk5rap3Q99LM2 Gm6244-201ENSMUST00000178732 841 ntBASIC12.99□□□□□ -0.33
Cdk5rap3Q99LM2 Gm24196-201ENSMUST00000179161 110 ntBASIC12.99□□□□□ -0.33
Cdk5rap3Q99LM2 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.99□□□□□ -0.33
Cdk5rap3Q99LM2 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.99□□□□□ -0.33
Cdk5rap3Q99LM2 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.99□□□□□ -0.33
Cdk5rap3Q99LM2 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk5rap3Q99LM2 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.99□□□□□ -0.33
Cdk5rap3Q99LM2 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk5rap3Q99LM2 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk5rap3Q99LM2 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk5rap3Q99LM2 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk5rap3Q99LM2 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk5rap3Q99LM2 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk5rap3Q99LM2 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Cdk5rap3Q99LM2 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk5rap3Q99LM2 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk5rap3Q99LM2 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk5rap3Q99LM2 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Cdk5rap3Q99LM2 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk5rap3Q99LM2 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.99□□□□□ -0.33
Cdk5rap3Q99LM2 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk5rap3Q99LM2 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.98□□□□□ -0.33
Cdk5rap3Q99LM2 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdk5rap3Q99LM2 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdk5rap3Q99LM2 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdk5rap3Q99LM2 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.98□□□□□ -0.33
Cdk5rap3Q99LM2 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Cdk5rap3Q99LM2 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Cdk5rap3Q99LM2 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.98□□□□□ -0.33
Cdk5rap3Q99LM2 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdk5rap3Q99LM2 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdk5rap3Q99LM2 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdk5rap3Q99LM2 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdk5rap3Q99LM2 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdk5rap3Q99LM2 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Cdk5rap3Q99LM2 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdk5rap3Q99LM2 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdk5rap3Q99LM2 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdk5rap3Q99LM2 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.98□□□□□ -0.33
Cdk5rap3Q99LM2 Mir1894-201ENSMUST00000122802 81 ntBASIC12.98□□□□□ -0.33
Cdk5rap3Q99LM2 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.98□□□□□ -0.33
Cdk5rap3Q99LM2 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdk5rap3Q99LM2 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Cdk5rap3Q99LM2 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.98□□□□□ -0.33
Cdk5rap3Q99LM2 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdk5rap3Q99LM2 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.98□□□□□ -0.33
Cdk5rap3Q99LM2 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Cdk5rap3Q99LM2 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.98□□□□□ -0.33
Cdk5rap3Q99LM2 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdk5rap3Q99LM2 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdk5rap3Q99LM2 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdk5rap3Q99LM2 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Cdk5rap3Q99LM2 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdk5rap3Q99LM2 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdk5rap3Q99LM2 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdk5rap3Q99LM2 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Cdk5rap3Q99LM2 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdk5rap3Q99LM2 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.98□□□□□ -0.33
Cdk5rap3Q99LM2 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdk5rap3Q99LM2 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms