Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Lysmd3Q99LE3 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Lysmd3Q99LE3 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Lysmd3Q99LE3 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.02□□□□□ -0.32
Lysmd3Q99LE3 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.02□□□□□ -0.32
Lysmd3Q99LE3 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lysmd3Q99LE3 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lysmd3Q99LE3 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lysmd3Q99LE3 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.02□□□□□ -0.33
Lysmd3Q99LE3 Gm15547-201ENSMUST00000122152 333 ntBASIC13.02□□□□□ -0.33
Lysmd3Q99LE3 Gm25668-201ENSMUST00000157700 129 ntBASIC13.02□□□□□ -0.33
Lysmd3Q99LE3 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lysmd3Q99LE3 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lysmd3Q99LE3 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.02□□□□□ -0.33
Lysmd3Q99LE3 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lysmd3Q99LE3 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lysmd3Q99LE3 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lysmd3Q99LE3 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC13.02□□□□□ -0.33
Lysmd3Q99LE3 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lysmd3Q99LE3 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lysmd3Q99LE3 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lysmd3Q99LE3 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lysmd3Q99LE3 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Lysmd3Q99LE3 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lysmd3Q99LE3 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lysmd3Q99LE3 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lysmd3Q99LE3 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lysmd3Q99LE3 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lysmd3Q99LE3 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lysmd3Q99LE3 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.02□□□□□ -0.33
Lysmd3Q99LE3 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lysmd3Q99LE3 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.02□□□□□ -0.33
Lysmd3Q99LE3 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lysmd3Q99LE3 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lysmd3Q99LE3 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lysmd3Q99LE3 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Lysmd3Q99LE3 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.01□□□□□ -0.33
Lysmd3Q99LE3 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lysmd3Q99LE3 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lysmd3Q99LE3 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lysmd3Q99LE3 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lysmd3Q99LE3 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lysmd3Q99LE3 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lysmd3Q99LE3 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lysmd3Q99LE3 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lysmd3Q99LE3 Mir877-201ENSMUST00000104738 85 ntBASIC13.01□□□□□ -0.33
Lysmd3Q99LE3 Gm12749-201ENSMUST00000122138 1159 ntBASIC13.01□□□□□ -0.33
Lysmd3Q99LE3 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.01□□□□□ -0.33
Lysmd3Q99LE3 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Lysmd3Q99LE3 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lysmd3Q99LE3 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.01□□□□□ -0.33
Lysmd3Q99LE3 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lysmd3Q99LE3 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lysmd3Q99LE3 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lysmd3Q99LE3 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lysmd3Q99LE3 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lysmd3Q99LE3 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lysmd3Q99LE3 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Lysmd3Q99LE3 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.01□□□□□ -0.33
Lysmd3Q99LE3 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lysmd3Q99LE3 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Lysmd3Q99LE3 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lysmd3Q99LE3 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lysmd3Q99LE3 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lysmd3Q99LE3 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lysmd3Q99LE3 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lysmd3Q99LE3 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lysmd3Q99LE3 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lysmd3Q99LE3 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lysmd3Q99LE3 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Lysmd3Q99LE3 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lysmd3Q99LE3 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lysmd3Q99LE3 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lysmd3Q99LE3 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lysmd3Q99LE3 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Lysmd3Q99LE3 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13□□□□□ -0.33
Lysmd3Q99LE3 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Lysmd3Q99LE3 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lysmd3Q99LE3 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13□□□□□ -0.33
Lysmd3Q99LE3 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Lysmd3Q99LE3 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lysmd3Q99LE3 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Lysmd3Q99LE3 Gm4864-201ENSMUST00000219894 1461 ntBASIC13□□□□□ -0.33
Lysmd3Q99LE3 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lysmd3Q99LE3 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lysmd3Q99LE3 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lysmd3Q99LE3 Gm12314-201ENSMUST00000118104 538 ntBASIC13□□□□□ -0.33
Lysmd3Q99LE3 Gm15808-201ENSMUST00000119046 604 ntBASIC13□□□□□ -0.33
Lysmd3Q99LE3 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC13□□□□□ -0.33
Lysmd3Q99LE3 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lysmd3Q99LE3 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lysmd3Q99LE3 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lysmd3Q99LE3 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13□□□□□ -0.33
Lysmd3Q99LE3 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC13□□□□□ -0.33
Lysmd3Q99LE3 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13□□□□□ -0.33
Lysmd3Q99LE3 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Lysmd3Q99LE3 Rassf8-202ENSMUST00000058538 1131 ntBASIC13□□□□□ -0.33
Lysmd3Q99LE3 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13□□□□□ -0.33
Lysmd3Q99LE3 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lysmd3Q99LE3 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms