Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.64□□□□□ -0.39
Cdk9Q99J95 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.64□□□□□ -0.39
Cdk9Q99J95 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk9Q99J95 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Cdk9Q99J95 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk9Q99J95 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.64□□□□□ -0.39
Cdk9Q99J95 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk9Q99J95 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk9Q99J95 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk9Q99J95 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk9Q99J95 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.64□□□□□ -0.39
Cdk9Q99J95 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk9Q99J95 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk9Q99J95 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.64□□□□□ -0.39
Cdk9Q99J95 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk9Q99J95 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk9Q99J95 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk9Q99J95 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.64□□□□□ -0.39
Cdk9Q99J95 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.64□□□□□ -0.39
Cdk9Q99J95 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk9Q99J95 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk9Q99J95 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cdk9Q99J95 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.64□□□□□ -0.39
Cdk9Q99J95 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.64□□□□□ -0.39
Cdk9Q99J95 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cdk9Q99J95 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk9Q99J95 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk9Q99J95 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk9Q99J95 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk9Q99J95 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk9Q99J95 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk9Q99J95 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk9Q99J95 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Cdk9Q99J95 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.64□□□□□ -0.39
Cdk9Q99J95 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk9Q99J95 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk9Q99J95 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.64□□□□□ -0.39
Cdk9Q99J95 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk9Q99J95 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk9Q99J95 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.63□□□□□ -0.39
Cdk9Q99J95 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Cdk9Q99J95 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk9Q99J95 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk9Q99J95 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Cdk9Q99J95 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Cdk9Q99J95 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk9Q99J95 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Cdk9Q99J95 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Cdk9Q99J95 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk9Q99J95 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk9Q99J95 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.63□□□□□ -0.39
Cdk9Q99J95 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Cdk9Q99J95 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk9Q99J95 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk9Q99J95 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.63□□□□□ -0.39
Cdk9Q99J95 Gm42612-201ENSMUST00000197986 623 ntBASIC12.63□□□□□ -0.39
Cdk9Q99J95 Gm43170-201ENSMUST00000199827 612 ntBASIC12.63□□□□□ -0.39
Cdk9Q99J95 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk9Q99J95 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk9Q99J95 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.63□□□□□ -0.39
Cdk9Q99J95 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Cdk9Q99J95 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Cdk9Q99J95 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk9Q99J95 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.63□□□□□ -0.39
Cdk9Q99J95 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk9Q99J95 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk9Q99J95 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk9Q99J95 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Cdk9Q99J95 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Cdk9Q99J95 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk9Q99J95 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.63□□□□□ -0.39
Cdk9Q99J95 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk9Q99J95 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk9Q99J95 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Cdk9Q99J95 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk9Q99J95 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk9Q99J95 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.62□□□□□ -0.39
Cdk9Q99J95 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk9Q99J95 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk9Q99J95 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk9Q99J95 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Cdk9Q99J95 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk9Q99J95 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk9Q99J95 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk9Q99J95 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk9Q99J95 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk9Q99J95 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.62□□□□□ -0.39
Cdk9Q99J95 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk9Q99J95 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk9Q99J95 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk9Q99J95 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.62□□□□□ -0.39
Cdk9Q99J95 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.62□□□□□ -0.39
Cdk9Q99J95 Gm12859-201ENSMUST00000117834 427 ntBASIC12.62□□□□□ -0.39
Cdk9Q99J95 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.62□□□□□ -0.39
Cdk9Q99J95 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.62□□□□□ -0.39
Cdk9Q99J95 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.62□□□□□ -0.39
Cdk9Q99J95 Gm28760-201ENSMUST00000185995 736 ntBASIC12.62□□□□□ -0.39
Cdk9Q99J95 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.62□□□□□ -0.39
Cdk9Q99J95 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.62□□□□□ -0.39
Cdk9Q99J95 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms