Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Rfc4Q99J62 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Rfc4Q99J62 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rfc4Q99J62 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.44□□□□□ -0.1
Rfc4Q99J62 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Rfc4Q99J62 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfc4Q99J62 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rfc4Q99J62 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Rfc4Q99J62 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfc4Q99J62 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Rfc4Q99J62 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Rfc4Q99J62 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfc4Q99J62 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rfc4Q99J62 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfc4Q99J62 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Rfc4Q99J62 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rfc4Q99J62 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.43□□□□□ -0.1
Rfc4Q99J62 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rfc4Q99J62 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rfc4Q99J62 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfc4Q99J62 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Rfc4Q99J62 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Rfc4Q99J62 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC14.43□□□□□ -0.1
Rfc4Q99J62 Gm5616-201ENSMUST00000165252 384 ntBASIC14.43□□□□□ -0.1
Rfc4Q99J62 Gm8741-201ENSMUST00000174736 384 ntBASIC14.43□□□□□ -0.1
Rfc4Q99J62 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC14.43□□□□□ -0.1
Rfc4Q99J62 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfc4Q99J62 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfc4Q99J62 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfc4Q99J62 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfc4Q99J62 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfc4Q99J62 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.43□□□□□ -0.1
Rfc4Q99J62 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Rfc4Q99J62 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfc4Q99J62 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Rfc4Q99J62 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC14.43□□□□□ -0.1
Rfc4Q99J62 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Rfc4Q99J62 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfc4Q99J62 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfc4Q99J62 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfc4Q99J62 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfc4Q99J62 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfc4Q99J62 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC14.42□□□□□ -0.1
Rfc4Q99J62 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfc4Q99J62 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfc4Q99J62 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rfc4Q99J62 Gm15432-201ENSMUST00000121106 195 ntBASIC14.42□□□□□ -0.1
Rfc4Q99J62 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC14.42□□□□□ -0.1
Rfc4Q99J62 Gm27438-201ENSMUST00000183480 110 ntBASIC14.42□□□□□ -0.1
Rfc4Q99J62 AC163667.3-201ENSMUST00000225774 222 ntBASIC14.42□□□□□ -0.1
Rfc4Q99J62 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Rfc4Q99J62 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfc4Q99J62 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfc4Q99J62 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Rfc4Q99J62 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rfc4Q99J62 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rfc4Q99J62 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfc4Q99J62 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rfc4Q99J62 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.42□□□□□ -0.1
Rfc4Q99J62 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.42□□□□□ -0.1
Rfc4Q99J62 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfc4Q99J62 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Rfc4Q99J62 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.42□□□□□ -0.1
Rfc4Q99J62 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfc4Q99J62 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfc4Q99J62 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfc4Q99J62 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rfc4Q99J62 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rfc4Q99J62 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfc4Q99J62 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Rfc4Q99J62 Gm18626-201ENSMUST00000221512 1409 ntBASIC14.41□□□□□ -0.1
Rfc4Q99J62 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfc4Q99J62 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfc4Q99J62 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Rfc4Q99J62 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfc4Q99J62 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Rfc4Q99J62 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Rfc4Q99J62 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfc4Q99J62 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfc4Q99J62 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfc4Q99J62 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfc4Q99J62 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfc4Q99J62 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rfc4Q99J62 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rfc4Q99J62 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.41□□□□□ -0.1
Rfc4Q99J62 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfc4Q99J62 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rfc4Q99J62 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rfc4Q99J62 Rmrp-201ENSMUST00000157463 271 ntBASIC14.41□□□□□ -0.1
Rfc4Q99J62 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Rfc4Q99J62 Gm19459-201ENSMUST00000176240 835 ntBASIC14.41□□□□□ -0.1
Rfc4Q99J62 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC14.41□□□□□ -0.1
Rfc4Q99J62 Gm42937-201ENSMUST00000197360 752 ntBASIC14.41□□□□□ -0.1
Rfc4Q99J62 Gm44545-201ENSMUST00000208262 746 ntBASIC14.41□□□□□ -0.1
Rfc4Q99J62 Gm18041-201ENSMUST00000218210 618 ntBASIC14.41□□□□□ -0.1
Rfc4Q99J62 AC125486.1-201ENSMUST00000218701 320 ntBASIC14.41□□□□□ -0.1
Rfc4Q99J62 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Rfc4Q99J62 AL732506.1-201ENSMUST00000226420 281 ntBASIC14.41□□□□□ -0.1
Rfc4Q99J62 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfc4Q99J62 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms