Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Thumpd1Q99J36 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Thumpd1Q99J36 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Thumpd1Q99J36 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Thumpd1Q99J36 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Thumpd1Q99J36 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Thumpd1Q99J36 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
Thumpd1Q99J36 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Thumpd1Q99J36 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.16□□□□□ -0.62
Thumpd1Q99J36 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Thumpd1Q99J36 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Thumpd1Q99J36 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Thumpd1Q99J36 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Thumpd1Q99J36 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Thumpd1Q99J36 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Thumpd1Q99J36 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.16□□□□□ -0.62
Thumpd1Q99J36 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.16□□□□□ -0.62
Thumpd1Q99J36 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Thumpd1Q99J36 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Thumpd1Q99J36 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Thumpd1Q99J36 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Thumpd1Q99J36 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.16□□□□□ -0.62
Thumpd1Q99J36 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.16□□□□□ -0.62
Thumpd1Q99J36 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.16□□□□□ -0.62
Thumpd1Q99J36 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.16□□□□□ -0.62
Thumpd1Q99J36 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Thumpd1Q99J36 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Thumpd1Q99J36 Gm11618-201ENSMUST00000117946 267 ntBASIC11.16□□□□□ -0.62
Thumpd1Q99J36 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Thumpd1Q99J36 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Thumpd1Q99J36 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC11.16□□□□□ -0.62
Thumpd1Q99J36 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Thumpd1Q99J36 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.16□□□□□ -0.62
Thumpd1Q99J36 Gm42612-201ENSMUST00000197986 623 ntBASIC11.16□□□□□ -0.62
Thumpd1Q99J36 Gm43170-201ENSMUST00000199827 612 ntBASIC11.16□□□□□ -0.62
Thumpd1Q99J36 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.16□□□□□ -0.62
Thumpd1Q99J36 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC11.16□□□□□ -0.62
Thumpd1Q99J36 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Thumpd1Q99J36 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Thumpd1Q99J36 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Thumpd1Q99J36 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Thumpd1Q99J36 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Thumpd1Q99J36 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Thumpd1Q99J36 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Thumpd1Q99J36 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Thumpd1Q99J36 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.16□□□□□ -0.62
Thumpd1Q99J36 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
Thumpd1Q99J36 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Thumpd1Q99J36 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Thumpd1Q99J36 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Thumpd1Q99J36 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Thumpd1Q99J36 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Thumpd1Q99J36 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Thumpd1Q99J36 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Thumpd1Q99J36 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Thumpd1Q99J36 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Thumpd1Q99J36 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Thumpd1Q99J36 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Thumpd1Q99J36 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Thumpd1Q99J36 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Thumpd1Q99J36 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Thumpd1Q99J36 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Thumpd1Q99J36 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
Thumpd1Q99J36 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Thumpd1Q99J36 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Thumpd1Q99J36 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Thumpd1Q99J36 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Thumpd1Q99J36 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Thumpd1Q99J36 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.15□□□□□ -0.62
Thumpd1Q99J36 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Thumpd1Q99J36 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.15□□□□□ -0.62
Thumpd1Q99J36 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Thumpd1Q99J36 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Thumpd1Q99J36 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.15□□□□□ -0.62
Thumpd1Q99J36 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
Thumpd1Q99J36 AC139382.1-201ENSMUST00000221402 498 ntBASIC11.15□□□□□ -0.62
Thumpd1Q99J36 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Thumpd1Q99J36 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Thumpd1Q99J36 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Thumpd1Q99J36 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Thumpd1Q99J36 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Thumpd1Q99J36 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.15□□□□□ -0.62
Thumpd1Q99J36 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Thumpd1Q99J36 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.15□□□□□ -0.62
Thumpd1Q99J36 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Thumpd1Q99J36 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Thumpd1Q99J36 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Thumpd1Q99J36 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
Thumpd1Q99J36 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.15□□□□□ -0.62
Thumpd1Q99J36 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Thumpd1Q99J36 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Thumpd1Q99J36 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Thumpd1Q99J36 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.14□□□□□ -0.63
Thumpd1Q99J36 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Thumpd1Q99J36 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Thumpd1Q99J36 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Thumpd1Q99J36 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Thumpd1Q99J36 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Thumpd1Q99J36 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.14□□□□□ -0.63
Thumpd1Q99J36 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms