Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm5354-201ENSMUST00000182417 973 ntBASIC12.71□□□□□ -0.37
Pcdhb3Q91XZ7 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC12.71□□□□□ -0.37
Pcdhb3Q91XZ7 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb3Q91XZ7 Gm45151-201ENSMUST00000205445 712 ntTSL 2 BASIC12.71□□□□□ -0.37
Pcdhb3Q91XZ7 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.71□□□□□ -0.37
Pcdhb3Q91XZ7 CT025525.1-201ENSMUST00000226325 1054 ntBASIC12.71□□□□□ -0.37
Pcdhb3Q91XZ7 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb3Q91XZ7 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb3Q91XZ7 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb3Q91XZ7 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb3Q91XZ7 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb3Q91XZ7 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Pcdhb3Q91XZ7 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb3Q91XZ7 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.71□□□□□ -0.37
Pcdhb3Q91XZ7 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb3Q91XZ7 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.71□□□□□ -0.38
Pcdhb3Q91XZ7 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhb3Q91XZ7 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhb3Q91XZ7 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhb3Q91XZ7 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhb3Q91XZ7 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhb3Q91XZ7 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhb3Q91XZ7 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhb3Q91XZ7 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Pcdhb3Q91XZ7 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb3Q91XZ7 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb3Q91XZ7 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC12.7□□□□□ -0.38
Pcdhb3Q91XZ7 AC140393.3-201ENSMUST00000228396 1352 ntBASIC12.7□□□□□ -0.38
Pcdhb3Q91XZ7 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb3Q91XZ7 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb3Q91XZ7 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb3Q91XZ7 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb3Q91XZ7 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb3Q91XZ7 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.7□□□□□ -0.38
Pcdhb3Q91XZ7 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb3Q91XZ7 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb3Q91XZ7 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Pcdhb3Q91XZ7 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb3Q91XZ7 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb3Q91XZ7 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb3Q91XZ7 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb3Q91XZ7 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.7□□□□□ -0.38
Pcdhb3Q91XZ7 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Pcdhb3Q91XZ7 Gm27772-201ENSMUST00000184900 187 ntBASIC12.7□□□□□ -0.38
Pcdhb3Q91XZ7 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC12.7□□□□□ -0.38
Pcdhb3Q91XZ7 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb3Q91XZ7 Gm44554-201ENSMUST00000208738 147 ntBASIC12.7□□□□□ -0.38
Pcdhb3Q91XZ7 Gm9908-201ENSMUST00000211534 448 ntBASIC12.7□□□□□ -0.38
Pcdhb3Q91XZ7 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Pcdhb3Q91XZ7 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.7□□□□□ -0.38
Pcdhb3Q91XZ7 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Pcdhb3Q91XZ7 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Pcdhb3Q91XZ7 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb3Q91XZ7 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Pcdhb3Q91XZ7 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.7□□□□□ -0.38
Pcdhb3Q91XZ7 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.7□□□□□ -0.38
Pcdhb3Q91XZ7 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb3Q91XZ7 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb3Q91XZ7 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb3Q91XZ7 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.7□□□□□ -0.38
Pcdhb3Q91XZ7 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Pcdhb3Q91XZ7 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb3Q91XZ7 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb3Q91XZ7 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb3Q91XZ7 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Pcdhb3Q91XZ7 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 AC163296.2-201ENSMUST00000220177 1315 ntBASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 Gm12372-201ENSMUST00000121654 768 ntBASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 Mir6392-201ENSMUST00000184924 108 ntBASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 Gm21139-201ENSMUST00000186594 877 ntBASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 Gm45384-201ENSMUST00000210451 277 ntBASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 AC173345.3-201ENSMUST00000221245 1093 ntBASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 AC153506.1-201ENSMUST00000218768 2915 ntBASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms