Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb5Q91XZ5 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Pcdhb5Q91XZ5 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb5Q91XZ5 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb5Q91XZ5 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Pcdhb5Q91XZ5 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb5Q91XZ5 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb5Q91XZ5 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb5Q91XZ5 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb5Q91XZ5 Gm10176-201ENSMUST00000159707 2264 ntBASIC14.75□□□□□ -0.05
Pcdhb5Q91XZ5 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb5Q91XZ5 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb5Q91XZ5 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb5Q91XZ5 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC14.74□□□□□ -0.05
Pcdhb5Q91XZ5 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb5Q91XZ5 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.74□□□□□ -0.05
Pcdhb5Q91XZ5 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb5Q91XZ5 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Pcdhb5Q91XZ5 Gm44851-201ENSMUST00000205735 2309 ntBASIC14.74□□□□□ -0.05
Pcdhb5Q91XZ5 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb5Q91XZ5 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb5Q91XZ5 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
Pcdhb5Q91XZ5 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
Pcdhb5Q91XZ5 Gm13611-201ENSMUST00000118269 318 ntBASIC14.74□□□□□ -0.05
Pcdhb5Q91XZ5 Gm8546-201ENSMUST00000178288 1264 ntBASIC14.74□□□□□ -0.05
Pcdhb5Q91XZ5 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC14.74□□□□□ -0.05
Pcdhb5Q91XZ5 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC14.74□□□□□ -0.05
Pcdhb5Q91XZ5 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC14.74□□□□□ -0.05
Pcdhb5Q91XZ5 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC14.74□□□□□ -0.05
Pcdhb5Q91XZ5 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb5Q91XZ5 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb5Q91XZ5 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb5Q91XZ5 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb5Q91XZ5 Grk6-205ENSMUST00000224653 2976 ntBASIC14.74□□□□□ -0.05
Pcdhb5Q91XZ5 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb5Q91XZ5 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC14.74□□□□□ -0.05
Pcdhb5Q91XZ5 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb5Q91XZ5 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Pcdhb5Q91XZ5 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb5Q91XZ5 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb5Q91XZ5 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb5Q91XZ5 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb5Q91XZ5 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Pcdhb5Q91XZ5 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC14.73□□□□□ -0.05
Pcdhb5Q91XZ5 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb5Q91XZ5 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb5Q91XZ5 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb5Q91XZ5 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb5Q91XZ5 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb5Q91XZ5 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb5Q91XZ5 AC151895.1-201ENSMUST00000219025 1742 ntBASIC14.73□□□□□ -0.05
Pcdhb5Q91XZ5 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb5Q91XZ5 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb5Q91XZ5 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC14.73□□□□□ -0.05
Pcdhb5Q91XZ5 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Pcdhb5Q91XZ5 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC14.73□□□□□ -0.05
Pcdhb5Q91XZ5 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC14.73□□□□□ -0.05
Pcdhb5Q91XZ5 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb5Q91XZ5 Gm6039-201ENSMUST00000121667 1250 ntBASIC14.73□□□□□ -0.05
Pcdhb5Q91XZ5 Gm23699-201ENSMUST00000158835 135 ntBASIC14.73□□□□□ -0.05
Pcdhb5Q91XZ5 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb5Q91XZ5 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC14.73□□□□□ -0.05
Pcdhb5Q91XZ5 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb5Q91XZ5 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb5Q91XZ5 Gm5523-201ENSMUST00000180415 997 ntBASIC14.73□□□□□ -0.05
Pcdhb5Q91XZ5 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC14.73□□□□□ -0.05
Pcdhb5Q91XZ5 Gm21027-201ENSMUST00000219300 1236 ntBASIC14.73□□□□□ -0.05
Pcdhb5Q91XZ5 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC14.73□□□□□ -0.05
Pcdhb5Q91XZ5 Dhrs4-202ENSMUST00000226168 828 ntBASIC14.73□□□□□ -0.05
Pcdhb5Q91XZ5 AC131330.1-201ENSMUST00000227814 1015 ntBASIC14.73□□□□□ -0.05
Pcdhb5Q91XZ5 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb5Q91XZ5 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb5Q91XZ5 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb5Q91XZ5 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb5Q91XZ5 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Pcdhb5Q91XZ5 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb5Q91XZ5 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb5Q91XZ5 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb5Q91XZ5 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb5Q91XZ5 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb5Q91XZ5 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb5Q91XZ5 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb5Q91XZ5 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb5Q91XZ5 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb5Q91XZ5 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb5Q91XZ5 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb5Q91XZ5 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb5Q91XZ5 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb5Q91XZ5 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb5Q91XZ5 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb5Q91XZ5 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC14.72□□□□□ -0.05
Pcdhb5Q91XZ5 Gm23119-201ENSMUST00000158610 140 ntBASIC14.72□□□□□ -0.05
Pcdhb5Q91XZ5 Gm5732-201ENSMUST00000182596 1007 ntBASIC14.72□□□□□ -0.05
Pcdhb5Q91XZ5 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb5Q91XZ5 Spcs1-203ENSMUST00000226374 592 ntBASIC14.72□□□□□ -0.05
Pcdhb5Q91XZ5 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb5Q91XZ5 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb5Q91XZ5 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb5Q91XZ5 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb5Q91XZ5 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 99.2 ms