Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC14.42□□□□□ -0.1
Ddx41Q91VN6 Ighv8-10-201ENSMUST00000199579 358 ntBASIC14.42□□□□□ -0.1
Ddx41Q91VN6 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx41Q91VN6 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC14.42□□□□□ -0.1
Ddx41Q91VN6 AC122371.3-201ENSMUST00000223402 1061 ntBASIC14.42□□□□□ -0.1
Ddx41Q91VN6 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx41Q91VN6 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ddx41Q91VN6 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ddx41Q91VN6 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx41Q91VN6 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx41Q91VN6 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx41Q91VN6 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx41Q91VN6 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx41Q91VN6 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx41Q91VN6 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx41Q91VN6 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx41Q91VN6 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ddx41Q91VN6 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx41Q91VN6 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx41Q91VN6 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ddx41Q91VN6 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ddx41Q91VN6 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx41Q91VN6 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.41□□□□□ -0.1
Ddx41Q91VN6 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx41Q91VN6 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx41Q91VN6 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC14.41□□□□□ -0.1
Ddx41Q91VN6 Gm12749-201ENSMUST00000122138 1159 ntBASIC14.41□□□□□ -0.1
Ddx41Q91VN6 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx41Q91VN6 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC14.41□□□□□ -0.1
Ddx41Q91VN6 Gm38000-201ENSMUST00000192390 1215 ntBASIC14.41□□□□□ -0.1
Ddx41Q91VN6 Gm43416-201ENSMUST00000201916 1015 ntBASIC14.41□□□□□ -0.1
Ddx41Q91VN6 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC14.41□□□□□ -0.1
Ddx41Q91VN6 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC14.41□□□□□ -0.1
Ddx41Q91VN6 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC14.41□□□□□ -0.1
Ddx41Q91VN6 AC093022.1-201ENSMUST00000226949 1072 ntBASIC14.41□□□□□ -0.1
Ddx41Q91VN6 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx41Q91VN6 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ddx41Q91VN6 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx41Q91VN6 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Ddx41Q91VN6 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx41Q91VN6 Gm8228-201ENSMUST00000189949 2192 ntBASIC14.41□□□□□ -0.1
Ddx41Q91VN6 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx41Q91VN6 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx41Q91VN6 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx41Q91VN6 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Ddx41Q91VN6 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx41Q91VN6 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx41Q91VN6 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx41Q91VN6 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ddx41Q91VN6 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx41Q91VN6 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx41Q91VN6 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx41Q91VN6 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx41Q91VN6 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx41Q91VN6 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx41Q91VN6 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx41Q91VN6 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Ddx41Q91VN6 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx41Q91VN6 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx41Q91VN6 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Ddx41Q91VN6 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx41Q91VN6 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ddx41Q91VN6 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx41Q91VN6 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx41Q91VN6 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx41Q91VN6 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx41Q91VN6 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ddx41Q91VN6 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx41Q91VN6 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Ddx41Q91VN6 Gm20482-202ENSMUST00000174729 825 ntBASIC14.4□□□□□ -0.1
Ddx41Q91VN6 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx41Q91VN6 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx41Q91VN6 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ddx41Q91VN6 Gm8099-201ENSMUST00000200510 742 ntBASIC14.4□□□□□ -0.1
Ddx41Q91VN6 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx41Q91VN6 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx41Q91VN6 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx41Q91VN6 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx41Q91VN6 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx41Q91VN6 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx41Q91VN6 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ddx41Q91VN6 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx41Q91VN6 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx41Q91VN6 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx41Q91VN6 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx41Q91VN6 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx41Q91VN6 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx41Q91VN6 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx41Q91VN6 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx41Q91VN6 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ddx41Q91VN6 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
Ddx41Q91VN6 Adra1a-206ENSMUST00000225182 2337 ntBASIC14.4□□□□□ -0.11
Ddx41Q91VN6 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx41Q91VN6 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ddx41Q91VN6 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx41Q91VN6 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx41Q91VN6 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx41Q91VN6 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx41Q91VN6 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ddx41Q91VN6 Gm45011-201ENSMUST00000207620 2297 ntBASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms