Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vsx1Q91V10 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vsx1Q91V10 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vsx1Q91V10 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Vsx1Q91V10 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vsx1Q91V10 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vsx1Q91V10 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vsx1Q91V10 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vsx1Q91V10 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vsx1Q91V10 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.42□□□□□ -0.42
Vsx1Q91V10 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.42□□□□□ -0.42
Vsx1Q91V10 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC12.42□□□□□ -0.42
Vsx1Q91V10 Gm13888-201ENSMUST00000119148 422 ntBASIC12.42□□□□□ -0.42
Vsx1Q91V10 Gm11450-201ENSMUST00000121144 333 ntBASIC12.42□□□□□ -0.42
Vsx1Q91V10 Gm14832-201ENSMUST00000121289 322 ntBASIC12.42□□□□□ -0.42
Vsx1Q91V10 Gm5778-201ENSMUST00000171003 1072 ntBASIC12.42□□□□□ -0.42
Vsx1Q91V10 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.42□□□□□ -0.42
Vsx1Q91V10 Gm4607-201ENSMUST00000206649 577 ntBASIC12.42□□□□□ -0.42
Vsx1Q91V10 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC12.42□□□□□ -0.42
Vsx1Q91V10 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.42□□□□□ -0.42
Vsx1Q91V10 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Vsx1Q91V10 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vsx1Q91V10 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Vsx1Q91V10 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Vsx1Q91V10 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vsx1Q91V10 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vsx1Q91V10 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Vsx1Q91V10 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Vsx1Q91V10 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vsx1Q91V10 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.42□□□□□ -0.42
Vsx1Q91V10 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vsx1Q91V10 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vsx1Q91V10 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vsx1Q91V10 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.42□□□□□ -0.42
Vsx1Q91V10 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Vsx1Q91V10 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vsx1Q91V10 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Vsx1Q91V10 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vsx1Q91V10 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vsx1Q91V10 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vsx1Q91V10 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vsx1Q91V10 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vsx1Q91V10 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vsx1Q91V10 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vsx1Q91V10 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Vsx1Q91V10 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Vsx1Q91V10 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vsx1Q91V10 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.41□□□□□ -0.42
Vsx1Q91V10 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.41□□□□□ -0.42
Vsx1Q91V10 Gm11675-201ENSMUST00000121873 832 ntBASIC12.41□□□□□ -0.42
Vsx1Q91V10 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vsx1Q91V10 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC12.41□□□□□ -0.42
Vsx1Q91V10 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC12.41□□□□□ -0.42
Vsx1Q91V10 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.41□□□□□ -0.42
Vsx1Q91V10 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.41□□□□□ -0.42
Vsx1Q91V10 Gm32999-201ENSMUST00000192693 562 ntBASIC12.41□□□□□ -0.42
Vsx1Q91V10 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.41□□□□□ -0.42
Vsx1Q91V10 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.41□□□□□ -0.42
Vsx1Q91V10 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC12.41□□□□□ -0.42
Vsx1Q91V10 Gm7600-201ENSMUST00000209657 785 ntBASIC12.41□□□□□ -0.42
Vsx1Q91V10 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.41□□□□□ -0.42
Vsx1Q91V10 AC159103.1-201ENSMUST00000228325 429 ntBASIC12.41□□□□□ -0.42
Vsx1Q91V10 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vsx1Q91V10 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vsx1Q91V10 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vsx1Q91V10 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Vsx1Q91V10 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Vsx1Q91V10 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vsx1Q91V10 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.41□□□□□ -0.42
Vsx1Q91V10 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vsx1Q91V10 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.41□□□□□ -0.42
Vsx1Q91V10 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vsx1Q91V10 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vsx1Q91V10 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vsx1Q91V10 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vsx1Q91V10 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vsx1Q91V10 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vsx1Q91V10 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Vsx1Q91V10 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vsx1Q91V10 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vsx1Q91V10 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vsx1Q91V10 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vsx1Q91V10 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vsx1Q91V10 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vsx1Q91V10 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vsx1Q91V10 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vsx1Q91V10 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vsx1Q91V10 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vsx1Q91V10 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vsx1Q91V10 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vsx1Q91V10 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vsx1Q91V10 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vsx1Q91V10 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Vsx1Q91V10 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.4□□□□□ -0.42
Vsx1Q91V10 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vsx1Q91V10 Gm15515-201ENSMUST00000117827 822 ntBASIC12.4□□□□□ -0.42
Vsx1Q91V10 Gm12029-201ENSMUST00000120073 832 ntBASIC12.4□□□□□ -0.42
Vsx1Q91V10 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.4□□□□□ -0.42
Vsx1Q91V10 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.4□□□□□ -0.42
Vsx1Q91V10 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms