Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC10.51□□□□□ -0.73
H1fooQ8VIK3 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H1fooQ8VIK3 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H1fooQ8VIK3 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H1fooQ8VIK3 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
H1fooQ8VIK3 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
H1fooQ8VIK3 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
H1fooQ8VIK3 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
H1fooQ8VIK3 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H1fooQ8VIK3 Gm4984-201ENSMUST00000115987 360 ntBASIC10.51□□□□□ -0.73
H1fooQ8VIK3 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
H1fooQ8VIK3 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
H1fooQ8VIK3 Gm13394-201ENSMUST00000121658 1000 ntBASIC10.51□□□□□ -0.73
H1fooQ8VIK3 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
H1fooQ8VIK3 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC10.51□□□□□ -0.73
H1fooQ8VIK3 Gm7029-201ENSMUST00000173226 450 ntBASIC10.51□□□□□ -0.73
H1fooQ8VIK3 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC10.51□□□□□ -0.73
H1fooQ8VIK3 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC10.51□□□□□ -0.73
H1fooQ8VIK3 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
H1fooQ8VIK3 Gm32025-201ENSMUST00000217960 307 ntBASIC10.51□□□□□ -0.73
H1fooQ8VIK3 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
H1fooQ8VIK3 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H1fooQ8VIK3 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
H1fooQ8VIK3 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H1fooQ8VIK3 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
H1fooQ8VIK3 Nudt18-202ENSMUST00000228554 3619 ntBASIC10.51□□□□□ -0.73
H1fooQ8VIK3 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
H1fooQ8VIK3 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
H1fooQ8VIK3 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H1fooQ8VIK3 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
H1fooQ8VIK3 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
H1fooQ8VIK3 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H1fooQ8VIK3 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H1fooQ8VIK3 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H1fooQ8VIK3 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
H1fooQ8VIK3 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
H1fooQ8VIK3 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H1fooQ8VIK3 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H1fooQ8VIK3 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
H1fooQ8VIK3 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H1fooQ8VIK3 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
H1fooQ8VIK3 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
H1fooQ8VIK3 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC10.5□□□□□ -0.73
H1fooQ8VIK3 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
H1fooQ8VIK3 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
H1fooQ8VIK3 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
H1fooQ8VIK3 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.5□□□□□ -0.73
H1fooQ8VIK3 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
H1fooQ8VIK3 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
H1fooQ8VIK3 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
H1fooQ8VIK3 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC10.5□□□□□ -0.73
H1fooQ8VIK3 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
H1fooQ8VIK3 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC10.5□□□□□ -0.73
H1fooQ8VIK3 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
H1fooQ8VIK3 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC10.5□□□□□ -0.73
H1fooQ8VIK3 Gm11424-201ENSMUST00000121929 829 ntBASIC10.5□□□□□ -0.73
H1fooQ8VIK3 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC10.5□□□□□ -0.73
H1fooQ8VIK3 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
H1fooQ8VIK3 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
H1fooQ8VIK3 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC10.5□□□□□ -0.73
H1fooQ8VIK3 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
H1fooQ8VIK3 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
H1fooQ8VIK3 Gm10268-201ENSMUST00000085340 555 ntBASIC10.5□□□□□ -0.73
H1fooQ8VIK3 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
H1fooQ8VIK3 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
H1fooQ8VIK3 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
H1fooQ8VIK3 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
H1fooQ8VIK3 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
H1fooQ8VIK3 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
H1fooQ8VIK3 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
H1fooQ8VIK3 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
H1fooQ8VIK3 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
H1fooQ8VIK3 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC10.5□□□□□ -0.73
H1fooQ8VIK3 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC10.5□□□□□ -0.73
H1fooQ8VIK3 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
H1fooQ8VIK3 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
H1fooQ8VIK3 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.5□□□□□ -0.73
H1fooQ8VIK3 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
H1fooQ8VIK3 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
H1fooQ8VIK3 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
H1fooQ8VIK3 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.49□□□□□ -0.73
H1fooQ8VIK3 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
H1fooQ8VIK3 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
H1fooQ8VIK3 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
H1fooQ8VIK3 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
H1fooQ8VIK3 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
H1fooQ8VIK3 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
H1fooQ8VIK3 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
H1fooQ8VIK3 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
H1fooQ8VIK3 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
H1fooQ8VIK3 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
H1fooQ8VIK3 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
H1fooQ8VIK3 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
H1fooQ8VIK3 Gm8131-201ENSMUST00000213783 1570 ntBASIC10.49□□□□□ -0.73
H1fooQ8VIK3 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
H1fooQ8VIK3 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
H1fooQ8VIK3 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
H1fooQ8VIK3 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
H1fooQ8VIK3 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC10.49□□□□□ -0.73
H1fooQ8VIK3 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms