Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
TraipQ8VIG6 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
TraipQ8VIG6 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
TraipQ8VIG6 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TraipQ8VIG6 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.42□□□□□ -0.26
TraipQ8VIG6 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TraipQ8VIG6 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
TraipQ8VIG6 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TraipQ8VIG6 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TraipQ8VIG6 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.41□□□□□ -0.26
TraipQ8VIG6 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TraipQ8VIG6 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
TraipQ8VIG6 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TraipQ8VIG6 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.41□□□□□ -0.26
TraipQ8VIG6 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TraipQ8VIG6 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC13.41□□□□□ -0.26
TraipQ8VIG6 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
TraipQ8VIG6 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TraipQ8VIG6 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TraipQ8VIG6 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TraipQ8VIG6 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TraipQ8VIG6 Mir3102-201ENSMUST00000175555 104 ntBASIC13.41□□□□□ -0.26
TraipQ8VIG6 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TraipQ8VIG6 Gm44958-201ENSMUST00000203734 736 ntBASIC13.41□□□□□ -0.26
TraipQ8VIG6 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TraipQ8VIG6 Gm19994-201ENSMUST00000217086 586 ntBASIC13.41□□□□□ -0.26
TraipQ8VIG6 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TraipQ8VIG6 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TraipQ8VIG6 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TraipQ8VIG6 Gm18829-201ENSMUST00000188150 1622 ntBASIC13.41□□□□□ -0.26
TraipQ8VIG6 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TraipQ8VIG6 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TraipQ8VIG6 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TraipQ8VIG6 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TraipQ8VIG6 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TraipQ8VIG6 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TraipQ8VIG6 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.41□□□□□ -0.26
TraipQ8VIG6 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
TraipQ8VIG6 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.4□□□□□ -0.26
TraipQ8VIG6 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TraipQ8VIG6 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.4□□□□□ -0.26
TraipQ8VIG6 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
TraipQ8VIG6 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
TraipQ8VIG6 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TraipQ8VIG6 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TraipQ8VIG6 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TraipQ8VIG6 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TraipQ8VIG6 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TraipQ8VIG6 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TraipQ8VIG6 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TraipQ8VIG6 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
TraipQ8VIG6 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
TraipQ8VIG6 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
TraipQ8VIG6 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.4□□□□□ -0.26
TraipQ8VIG6 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TraipQ8VIG6 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TraipQ8VIG6 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC13.4□□□□□ -0.26
TraipQ8VIG6 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TraipQ8VIG6 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TraipQ8VIG6 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
TraipQ8VIG6 Gm9022-201ENSMUST00000182482 992 ntBASIC13.4□□□□□ -0.26
TraipQ8VIG6 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC13.4□□□□□ -0.26
TraipQ8VIG6 Gzmn-202ENSMUST00000225535 989 ntBASIC13.4□□□□□ -0.26
TraipQ8VIG6 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TraipQ8VIG6 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TraipQ8VIG6 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TraipQ8VIG6 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TraipQ8VIG6 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
TraipQ8VIG6 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TraipQ8VIG6 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.4□□□□□ -0.26
TraipQ8VIG6 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
TraipQ8VIG6 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TraipQ8VIG6 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.4□□□□□ -0.26
TraipQ8VIG6 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TraipQ8VIG6 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TraipQ8VIG6 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TraipQ8VIG6 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TraipQ8VIG6 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
TraipQ8VIG6 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TraipQ8VIG6 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TraipQ8VIG6 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TraipQ8VIG6 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TraipQ8VIG6 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TraipQ8VIG6 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.4□□□□□ -0.26
TraipQ8VIG6 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TraipQ8VIG6 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TraipQ8VIG6 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
TraipQ8VIG6 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TraipQ8VIG6 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TraipQ8VIG6 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TraipQ8VIG6 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TraipQ8VIG6 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TraipQ8VIG6 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TraipQ8VIG6 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TraipQ8VIG6 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TraipQ8VIG6 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TraipQ8VIG6 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TraipQ8VIG6 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TraipQ8VIG6 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TraipQ8VIG6 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms