Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 Gm31256-201ENSMUST00000194705 506 ntBASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ndc1Q8VCB1 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Ndc1Q8VCB1 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ndc1Q8VCB1 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ndc1Q8VCB1 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ndc1Q8VCB1 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ndc1Q8VCB1 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ndc1Q8VCB1 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ndc1Q8VCB1 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ndc1Q8VCB1 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ndc1Q8VCB1 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ndc1Q8VCB1 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ndc1Q8VCB1 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ndc1Q8VCB1 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.85□□□□□ -0.51
Ndc1Q8VCB1 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Ndc1Q8VCB1 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ndc1Q8VCB1 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ndc1Q8VCB1 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ndc1Q8VCB1 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Ndc1Q8VCB1 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ndc1Q8VCB1 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ndc1Q8VCB1 Gm13875-201ENSMUST00000120162 282 ntBASIC11.85□□□□□ -0.51
Ndc1Q8VCB1 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ndc1Q8VCB1 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ndc1Q8VCB1 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Ndc1Q8VCB1 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.85□□□□□ -0.51
Ndc1Q8VCB1 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.85□□□□□ -0.51
Ndc1Q8VCB1 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.85□□□□□ -0.51
Ndc1Q8VCB1 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ndc1Q8VCB1 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.85□□□□□ -0.51
Ndc1Q8VCB1 AC159747.1-201ENSMUST00000219903 265 ntBASIC11.85□□□□□ -0.51
Ndc1Q8VCB1 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ndc1Q8VCB1 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Ndc1Q8VCB1 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.85□□□□□ -0.51
Ndc1Q8VCB1 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ndc1Q8VCB1 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ndc1Q8VCB1 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ndc1Q8VCB1 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ndc1Q8VCB1 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ndc1Q8VCB1 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ndc1Q8VCB1 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.85□□□□□ -0.51
Ndc1Q8VCB1 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.85□□□□□ -0.51
Ndc1Q8VCB1 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ndc1Q8VCB1 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Ndc1Q8VCB1 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC11.85□□□□□ -0.51
Ndc1Q8VCB1 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ndc1Q8VCB1 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ndc1Q8VCB1 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ndc1Q8VCB1 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.84□□□□□ -0.51
Ndc1Q8VCB1 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.84□□□□□ -0.51
Ndc1Q8VCB1 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Ndc1Q8VCB1 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Ndc1Q8VCB1 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ndc1Q8VCB1 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ndc1Q8VCB1 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ndc1Q8VCB1 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.84□□□□□ -0.51
Ndc1Q8VCB1 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ndc1Q8VCB1 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ndc1Q8VCB1 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Ndc1Q8VCB1 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ndc1Q8VCB1 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ndc1Q8VCB1 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ndc1Q8VCB1 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ndc1Q8VCB1 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ndc1Q8VCB1 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ndc1Q8VCB1 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ndc1Q8VCB1 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ndc1Q8VCB1 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ndc1Q8VCB1 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms