Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trim29Q8R2Q0 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim29Q8R2Q0 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim29Q8R2Q0 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trim29Q8R2Q0 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.32□□□□□ -0.12
Trim29Q8R2Q0 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim29Q8R2Q0 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Trim29Q8R2Q0 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim29Q8R2Q0 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim29Q8R2Q0 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Trim29Q8R2Q0 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim29Q8R2Q0 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC14.32□□□□□ -0.12
Trim29Q8R2Q0 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC14.32□□□□□ -0.12
Trim29Q8R2Q0 Gm9431-201ENSMUST00000119765 1051 ntBASIC14.32□□□□□ -0.12
Trim29Q8R2Q0 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim29Q8R2Q0 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim29Q8R2Q0 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim29Q8R2Q0 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC14.32□□□□□ -0.12
Trim29Q8R2Q0 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trim29Q8R2Q0 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim29Q8R2Q0 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC14.32□□□□□ -0.12
Trim29Q8R2Q0 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim29Q8R2Q0 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim29Q8R2Q0 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim29Q8R2Q0 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim29Q8R2Q0 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim29Q8R2Q0 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim29Q8R2Q0 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim29Q8R2Q0 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim29Q8R2Q0 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trim29Q8R2Q0 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim29Q8R2Q0 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim29Q8R2Q0 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim29Q8R2Q0 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim29Q8R2Q0 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trim29Q8R2Q0 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim29Q8R2Q0 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim29Q8R2Q0 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim29Q8R2Q0 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Trim29Q8R2Q0 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC14.31□□□□□ -0.12
Trim29Q8R2Q0 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim29Q8R2Q0 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC14.31□□□□□ -0.12
Trim29Q8R2Q0 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim29Q8R2Q0 Gm37827-201ENSMUST00000194486 1542 ntBASIC14.31□□□□□ -0.12
Trim29Q8R2Q0 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trim29Q8R2Q0 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim29Q8R2Q0 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.31□□□□□ -0.12
Trim29Q8R2Q0 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim29Q8R2Q0 Gm17435-202ENSMUST00000212699 1998 ntBASIC14.31□□□□□ -0.12
Trim29Q8R2Q0 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim29Q8R2Q0 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim29Q8R2Q0 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trim29Q8R2Q0 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim29Q8R2Q0 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim29Q8R2Q0 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim29Q8R2Q0 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC14.31□□□□□ -0.12
Trim29Q8R2Q0 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim29Q8R2Q0 Gm11425-201ENSMUST00000119608 498 ntBASIC14.31□□□□□ -0.12
Trim29Q8R2Q0 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim29Q8R2Q0 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim29Q8R2Q0 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC14.31□□□□□ -0.12
Trim29Q8R2Q0 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim29Q8R2Q0 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim29Q8R2Q0 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trim29Q8R2Q0 Gm8565-201ENSMUST00000183259 1014 ntBASIC14.31□□□□□ -0.12
Trim29Q8R2Q0 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC14.31□□□□□ -0.12
Trim29Q8R2Q0 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC14.31□□□□□ -0.12
Trim29Q8R2Q0 Gm5781-201ENSMUST00000219792 443 ntBASIC14.31□□□□□ -0.12
Trim29Q8R2Q0 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim29Q8R2Q0 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim29Q8R2Q0 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim29Q8R2Q0 Gm9396-201ENSMUST00000076703 567 ntBASIC14.31□□□□□ -0.12
Trim29Q8R2Q0 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim29Q8R2Q0 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim29Q8R2Q0 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim29Q8R2Q0 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim29Q8R2Q0 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim29Q8R2Q0 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim29Q8R2Q0 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trim29Q8R2Q0 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim29Q8R2Q0 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim29Q8R2Q0 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim29Q8R2Q0 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim29Q8R2Q0 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim29Q8R2Q0 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim29Q8R2Q0 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim29Q8R2Q0 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC14.3□□□□□ -0.12
Trim29Q8R2Q0 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim29Q8R2Q0 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim29Q8R2Q0 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim29Q8R2Q0 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim29Q8R2Q0 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim29Q8R2Q0 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim29Q8R2Q0 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim29Q8R2Q0 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim29Q8R2Q0 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim29Q8R2Q0 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim29Q8R2Q0 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trim29Q8R2Q0 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim29Q8R2Q0 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms