Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC16■□□□□ 0.15
Chmp7Q8R1T1 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Chmp7Q8R1T1 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Chmp7Q8R1T1 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC16■□□□□ 0.15
Chmp7Q8R1T1 Gm37912-201ENSMUST00000191895 3076 ntBASIC16■□□□□ 0.15
Chmp7Q8R1T1 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Chmp7Q8R1T1 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Chmp7Q8R1T1 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Chmp7Q8R1T1 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC16■□□□□ 0.15
Chmp7Q8R1T1 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC16■□□□□ 0.15
Chmp7Q8R1T1 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC16■□□□□ 0.15
Chmp7Q8R1T1 Gm43962-201ENSMUST00000203898 190 ntBASIC16■□□□□ 0.15
Chmp7Q8R1T1 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC16■□□□□ 0.15
Chmp7Q8R1T1 Gm45118-201ENSMUST00000208928 825 ntBASIC16■□□□□ 0.15
Chmp7Q8R1T1 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC16■□□□□ 0.15
Chmp7Q8R1T1 Gm14267-206ENSMUST00000226870 1209 ntBASIC16■□□□□ 0.15
Chmp7Q8R1T1 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Chmp7Q8R1T1 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Chmp7Q8R1T1 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Chmp7Q8R1T1 Gm10702-201ENSMUST00000098929 1268 ntBASIC16■□□□□ 0.15
Chmp7Q8R1T1 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Chmp7Q8R1T1 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Chmp7Q8R1T1 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC16■□□□□ 0.15
Chmp7Q8R1T1 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Chmp7Q8R1T1 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Chmp7Q8R1T1 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Chmp7Q8R1T1 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC16■□□□□ 0.15
Chmp7Q8R1T1 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Chmp7Q8R1T1 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Chmp7Q8R1T1 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
Chmp7Q8R1T1 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Chmp7Q8R1T1 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Chmp7Q8R1T1 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC16■□□□□ 0.15
Chmp7Q8R1T1 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Chmp7Q8R1T1 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC15.99■□□□□ 0.15
Chmp7Q8R1T1 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Chmp7Q8R1T1 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chmp7Q8R1T1 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chmp7Q8R1T1 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chmp7Q8R1T1 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chmp7Q8R1T1 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Chmp7Q8R1T1 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chmp7Q8R1T1 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chmp7Q8R1T1 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chmp7Q8R1T1 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chmp7Q8R1T1 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC15.99■□□□□ 0.15
Chmp7Q8R1T1 Gm6335-201ENSMUST00000118081 1194 ntBASIC15.99■□□□□ 0.15
Chmp7Q8R1T1 Gm7816-201ENSMUST00000119884 1194 ntBASIC15.99■□□□□ 0.15
Chmp7Q8R1T1 Gm11450-201ENSMUST00000121144 333 ntBASIC15.99■□□□□ 0.15
Chmp7Q8R1T1 Gm15542-201ENSMUST00000121585 1194 ntBASIC15.99■□□□□ 0.15
Chmp7Q8R1T1 Gm23119-201ENSMUST00000158610 140 ntBASIC15.99■□□□□ 0.15
Chmp7Q8R1T1 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC15.99■□□□□ 0.15
Chmp7Q8R1T1 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chmp7Q8R1T1 Gm18393-201ENSMUST00000208349 1131 ntBASIC15.99■□□□□ 0.15
Chmp7Q8R1T1 Gm29787-201ENSMUST00000222129 849 ntBASIC15.99■□□□□ 0.15
Chmp7Q8R1T1 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chmp7Q8R1T1 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chmp7Q8R1T1 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Chmp7Q8R1T1 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chmp7Q8R1T1 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chmp7Q8R1T1 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chmp7Q8R1T1 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chmp7Q8R1T1 AC123619.2-202ENSMUST00000225097 1568 ntBASIC15.99■□□□□ 0.15
Chmp7Q8R1T1 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chmp7Q8R1T1 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chmp7Q8R1T1 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chmp7Q8R1T1 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chmp7Q8R1T1 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chmp7Q8R1T1 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Chmp7Q8R1T1 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chmp7Q8R1T1 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chmp7Q8R1T1 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chmp7Q8R1T1 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chmp7Q8R1T1 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chmp7Q8R1T1 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chmp7Q8R1T1 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Chmp7Q8R1T1 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chmp7Q8R1T1 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Chmp7Q8R1T1 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Chmp7Q8R1T1 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chmp7Q8R1T1 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chmp7Q8R1T1 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Chmp7Q8R1T1 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chmp7Q8R1T1 Gm22133-201ENSMUST00000102082 109 ntBASIC15.98■□□□□ 0.15
Chmp7Q8R1T1 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC15.98■□□□□ 0.15
Chmp7Q8R1T1 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Chmp7Q8R1T1 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Chmp7Q8R1T1 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC15.98■□□□□ 0.15
Chmp7Q8R1T1 CT009718.3-201ENSMUST00000221116 367 ntBASIC15.98■□□□□ 0.15
Chmp7Q8R1T1 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chmp7Q8R1T1 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chmp7Q8R1T1 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC15.98■□□□□ 0.15
Chmp7Q8R1T1 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chmp7Q8R1T1 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chmp7Q8R1T1 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chmp7Q8R1T1 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chmp7Q8R1T1 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chmp7Q8R1T1 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Chmp7Q8R1T1 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Chmp7Q8R1T1 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 95.4 ms