Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sf3a1Q8K4Z5 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sf3a1Q8K4Z5 Gm27196-201ENSMUST00000184787 2582 ntBASIC15.35■□□□□ 0.05
Sf3a1Q8K4Z5 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sf3a1Q8K4Z5 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sf3a1Q8K4Z5 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sf3a1Q8K4Z5 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Sf3a1Q8K4Z5 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sf3a1Q8K4Z5 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sf3a1Q8K4Z5 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sf3a1Q8K4Z5 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sf3a1Q8K4Z5 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sf3a1Q8K4Z5 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sf3a1Q8K4Z5 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sf3a1Q8K4Z5 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC15.35■□□□□ 0.05
Sf3a1Q8K4Z5 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sf3a1Q8K4Z5 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Sf3a1Q8K4Z5 Gm38385-201ENSMUST00000194454 2351 ntBASIC15.34■□□□□ 0.05
Sf3a1Q8K4Z5 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sf3a1Q8K4Z5 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sf3a1Q8K4Z5 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sf3a1Q8K4Z5 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Sf3a1Q8K4Z5 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sf3a1Q8K4Z5 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sf3a1Q8K4Z5 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sf3a1Q8K4Z5 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sf3a1Q8K4Z5 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sf3a1Q8K4Z5 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
Sf3a1Q8K4Z5 Gm13875-201ENSMUST00000120162 282 ntBASIC15.34■□□□□ 0.05
Sf3a1Q8K4Z5 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC15.34■□□□□ 0.05
Sf3a1Q8K4Z5 Gm14760-201ENSMUST00000121831 999 ntBASIC15.34■□□□□ 0.05
Sf3a1Q8K4Z5 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sf3a1Q8K4Z5 Rmrp-201ENSMUST00000157463 271 ntBASIC15.34■□□□□ 0.05
Sf3a1Q8K4Z5 Gm27516-201ENSMUST00000184237 98 ntBASIC15.34■□□□□ 0.05
Sf3a1Q8K4Z5 Gm43438-201ENSMUST00000198133 379 ntBASIC15.34■□□□□ 0.05
Sf3a1Q8K4Z5 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC15.34■□□□□ 0.05
Sf3a1Q8K4Z5 AL732506.1-201ENSMUST00000226420 281 ntBASIC15.34■□□□□ 0.05
Sf3a1Q8K4Z5 Morn2-202ENSMUST00000227729 656 ntBASIC15.34■□□□□ 0.05
Sf3a1Q8K4Z5 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Sf3a1Q8K4Z5 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sf3a1Q8K4Z5 Gm4366-201ENSMUST00000201488 1342 ntBASIC15.34■□□□□ 0.05
Sf3a1Q8K4Z5 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sf3a1Q8K4Z5 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC15.34■□□□□ 0.05
Sf3a1Q8K4Z5 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sf3a1Q8K4Z5 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sf3a1Q8K4Z5 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Sf3a1Q8K4Z5 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sf3a1Q8K4Z5 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sf3a1Q8K4Z5 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sf3a1Q8K4Z5 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sf3a1Q8K4Z5 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
Sf3a1Q8K4Z5 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sf3a1Q8K4Z5 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sf3a1Q8K4Z5 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC15.33■□□□□ 0.04
Sf3a1Q8K4Z5 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC15.33■□□□□ 0.04
Sf3a1Q8K4Z5 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sf3a1Q8K4Z5 Gm37737-201ENSMUST00000195013 1638 ntBASIC15.33■□□□□ 0.04
Sf3a1Q8K4Z5 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sf3a1Q8K4Z5 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sf3a1Q8K4Z5 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
Sf3a1Q8K4Z5 Gm24231-201ENSMUST00000104315 133 ntBASIC15.33■□□□□ 0.04
Sf3a1Q8K4Z5 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Sf3a1Q8K4Z5 Gm12058-201ENSMUST00000118614 437 ntBASIC15.33■□□□□ 0.04
Sf3a1Q8K4Z5 Gm4986-201ENSMUST00000119731 549 ntBASIC15.33■□□□□ 0.04
Sf3a1Q8K4Z5 Gm8908-201ENSMUST00000121633 1024 ntBASIC15.33■□□□□ 0.04
Sf3a1Q8K4Z5 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC15.33■□□□□ 0.04
Sf3a1Q8K4Z5 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC15.33■□□□□ 0.04
Sf3a1Q8K4Z5 Mir8109-201ENSMUST00000184375 117 ntBASIC15.33■□□□□ 0.04
Sf3a1Q8K4Z5 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Sf3a1Q8K4Z5 Gm37489-201ENSMUST00000191883 159 ntBASIC15.33■□□□□ 0.04
Sf3a1Q8K4Z5 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Sf3a1Q8K4Z5 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sf3a1Q8K4Z5 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sf3a1Q8K4Z5 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sf3a1Q8K4Z5 Gm11661-201ENSMUST00000121761 1327 ntBASIC15.33■□□□□ 0.04
Sf3a1Q8K4Z5 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sf3a1Q8K4Z5 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sf3a1Q8K4Z5 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sf3a1Q8K4Z5 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sf3a1Q8K4Z5 Gm18222-201ENSMUST00000202416 1387 ntBASIC15.33■□□□□ 0.04
Sf3a1Q8K4Z5 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sf3a1Q8K4Z5 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sf3a1Q8K4Z5 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Sf3a1Q8K4Z5 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sf3a1Q8K4Z5 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sf3a1Q8K4Z5 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC15.32■□□□□ 0.04
Sf3a1Q8K4Z5 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sf3a1Q8K4Z5 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sf3a1Q8K4Z5 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sf3a1Q8K4Z5 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sf3a1Q8K4Z5 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sf3a1Q8K4Z5 Gm42748-201ENSMUST00000199354 2341 ntBASIC15.32■□□□□ 0.04
Sf3a1Q8K4Z5 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Sf3a1Q8K4Z5 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sf3a1Q8K4Z5 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sf3a1Q8K4Z5 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
Sf3a1Q8K4Z5 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sf3a1Q8K4Z5 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sf3a1Q8K4Z5 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC15.32■□□□□ 0.04
Sf3a1Q8K4Z5 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms