Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rtn1Q8K0T0 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rtn1Q8K0T0 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rtn1Q8K0T0 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rtn1Q8K0T0 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Rtn1Q8K0T0 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rtn1Q8K0T0 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rtn1Q8K0T0 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rtn1Q8K0T0 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rtn1Q8K0T0 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rtn1Q8K0T0 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rtn1Q8K0T0 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rtn1Q8K0T0 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rtn1Q8K0T0 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rtn1Q8K0T0 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rtn1Q8K0T0 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rtn1Q8K0T0 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rtn1Q8K0T0 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC14.49□□□□□ -0.09
Rtn1Q8K0T0 Gm13342-201ENSMUST00000121055 207 ntBASIC14.49□□□□□ -0.09
Rtn1Q8K0T0 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC14.49□□□□□ -0.09
Rtn1Q8K0T0 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC14.49□□□□□ -0.09
Rtn1Q8K0T0 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC14.49□□□□□ -0.09
Rtn1Q8K0T0 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC14.49□□□□□ -0.09
Rtn1Q8K0T0 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rtn1Q8K0T0 Mospd4-201ENSMUST00000180618 576 ntBASIC14.49□□□□□ -0.09
Rtn1Q8K0T0 Gm9022-201ENSMUST00000182482 992 ntBASIC14.49□□□□□ -0.09
Rtn1Q8K0T0 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC14.49□□□□□ -0.09
Rtn1Q8K0T0 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rtn1Q8K0T0 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rtn1Q8K0T0 Id2-201ENSMUST00000020974 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rtn1Q8K0T0 AC132446.1-201ENSMUST00000222655 226 ntBASIC14.49□□□□□ -0.09
Rtn1Q8K0T0 AC125209.1-201ENSMUST00000225812 766 ntBASIC14.49□□□□□ -0.09
Rtn1Q8K0T0 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rtn1Q8K0T0 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rtn1Q8K0T0 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rtn1Q8K0T0 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rtn1Q8K0T0 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rtn1Q8K0T0 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Rtn1Q8K0T0 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC14.49□□□□□ -0.09
Rtn1Q8K0T0 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rtn1Q8K0T0 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rtn1Q8K0T0 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Rtn1Q8K0T0 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
Rtn1Q8K0T0 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rtn1Q8K0T0 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rtn1Q8K0T0 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Rtn1Q8K0T0 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rtn1Q8K0T0 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rtn1Q8K0T0 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC14.49□□□□□ -0.09
Rtn1Q8K0T0 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rtn1Q8K0T0 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rtn1Q8K0T0 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rtn1Q8K0T0 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rtn1Q8K0T0 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC14.48□□□□□ -0.09
Rtn1Q8K0T0 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rtn1Q8K0T0 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rtn1Q8K0T0 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC14.48□□□□□ -0.09
Rtn1Q8K0T0 Gm4735-201ENSMUST00000138679 1302 ntBASIC14.48□□□□□ -0.09
Rtn1Q8K0T0 Gm5855-201ENSMUST00000200240 1305 ntBASIC14.48□□□□□ -0.09
Rtn1Q8K0T0 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Rtn1Q8K0T0 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rtn1Q8K0T0 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rtn1Q8K0T0 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rtn1Q8K0T0 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rtn1Q8K0T0 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC14.48□□□□□ -0.09
Rtn1Q8K0T0 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC14.48□□□□□ -0.09
Rtn1Q8K0T0 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rtn1Q8K0T0 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC14.48□□□□□ -0.09
Rtn1Q8K0T0 Gm10434-201ENSMUST00000101158 471 ntBASIC14.48□□□□□ -0.09
Rtn1Q8K0T0 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC14.48□□□□□ -0.09
Rtn1Q8K0T0 Gm13786-201ENSMUST00000122371 333 ntBASIC14.48□□□□□ -0.09
Rtn1Q8K0T0 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rtn1Q8K0T0 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rtn1Q8K0T0 Gm8801-201ENSMUST00000173255 1064 ntBASIC14.48□□□□□ -0.09
Rtn1Q8K0T0 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC14.48□□□□□ -0.09
Rtn1Q8K0T0 Gm27243-201ENSMUST00000183964 521 ntBASIC14.48□□□□□ -0.09
Rtn1Q8K0T0 Olfr284-202ENSMUST00000206647 966 ntBASIC14.48□□□□□ -0.09
Rtn1Q8K0T0 Gm6013-201ENSMUST00000212264 699 ntBASIC14.48□□□□□ -0.09
Rtn1Q8K0T0 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rtn1Q8K0T0 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Rtn1Q8K0T0 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Rtn1Q8K0T0 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Rtn1Q8K0T0 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rtn1Q8K0T0 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Rtn1Q8K0T0 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC14.48□□□□□ -0.09
Rtn1Q8K0T0 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Rtn1Q8K0T0 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rtn1Q8K0T0 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Rtn1Q8K0T0 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rtn1Q8K0T0 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rtn1Q8K0T0 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Rtn1Q8K0T0 Gm44758-201ENSMUST00000206096 2068 ntBASIC14.48□□□□□ -0.09
Rtn1Q8K0T0 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rtn1Q8K0T0 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rtn1Q8K0T0 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rtn1Q8K0T0 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC14.47□□□□□ -0.09
Rtn1Q8K0T0 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rtn1Q8K0T0 Gm44292-201ENSMUST00000205194 2364 ntBASIC14.47□□□□□ -0.09
Rtn1Q8K0T0 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rtn1Q8K0T0 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms