Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.14□□□□□ -0.15
Syne4Q8CII8 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syne4Q8CII8 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syne4Q8CII8 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syne4Q8CII8 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syne4Q8CII8 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syne4Q8CII8 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Syne4Q8CII8 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Syne4Q8CII8 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syne4Q8CII8 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Syne4Q8CII8 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syne4Q8CII8 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syne4Q8CII8 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.13□□□□□ -0.15
Syne4Q8CII8 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Syne4Q8CII8 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Syne4Q8CII8 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Syne4Q8CII8 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Syne4Q8CII8 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Syne4Q8CII8 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Syne4Q8CII8 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Syne4Q8CII8 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Syne4Q8CII8 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Syne4Q8CII8 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Syne4Q8CII8 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC14.13□□□□□ -0.15
Syne4Q8CII8 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC14.13□□□□□ -0.15
Syne4Q8CII8 Mup-ps26-201ENSMUST00000121751 202 ntBASIC14.13□□□□□ -0.15
Syne4Q8CII8 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC14.13□□□□□ -0.15
Syne4Q8CII8 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC14.13□□□□□ -0.15
Syne4Q8CII8 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC14.13□□□□□ -0.15
Syne4Q8CII8 Olfr1347-205ENSMUST00000220413 964 ntBASIC14.13□□□□□ -0.15
Syne4Q8CII8 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Syne4Q8CII8 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Syne4Q8CII8 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Syne4Q8CII8 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Syne4Q8CII8 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Syne4Q8CII8 Gm10288-201ENSMUST00000084614 537 ntBASIC14.13□□□□□ -0.15
Syne4Q8CII8 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Syne4Q8CII8 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Syne4Q8CII8 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Syne4Q8CII8 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Syne4Q8CII8 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Syne4Q8CII8 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Syne4Q8CII8 Retreg1-206ENSMUST00000228306 1430 ntBASIC14.13□□□□□ -0.15
Syne4Q8CII8 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Syne4Q8CII8 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Syne4Q8CII8 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Syne4Q8CII8 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Syne4Q8CII8 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Syne4Q8CII8 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC14.13□□□□□ -0.15
Syne4Q8CII8 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Syne4Q8CII8 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Syne4Q8CII8 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Syne4Q8CII8 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Syne4Q8CII8 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Syne4Q8CII8 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Syne4Q8CII8 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Syne4Q8CII8 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Syne4Q8CII8 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Syne4Q8CII8 Gm28719-201ENSMUST00000187779 1757 ntBASIC14.12□□□□□ -0.15
Syne4Q8CII8 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Syne4Q8CII8 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Syne4Q8CII8 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Syne4Q8CII8 Gm12795-201ENSMUST00000117594 539 ntBASIC14.12□□□□□ -0.15
Syne4Q8CII8 Gm12857-201ENSMUST00000117678 592 ntBASIC14.12□□□□□ -0.15
Syne4Q8CII8 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC14.12□□□□□ -0.15
Syne4Q8CII8 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Syne4Q8CII8 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Syne4Q8CII8 Gm9358-201ENSMUST00000183067 927 ntBASIC14.12□□□□□ -0.15
Syne4Q8CII8 Gm27530-201ENSMUST00000184096 98 ntBASIC14.12□□□□□ -0.15
Syne4Q8CII8 Gm9463-201ENSMUST00000206707 601 ntBASIC14.12□□□□□ -0.15
Syne4Q8CII8 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC14.12□□□□□ -0.15
Syne4Q8CII8 CT485607.1-201ENSMUST00000216100 85 ntBASIC14.12□□□□□ -0.15
Syne4Q8CII8 CT571245.2-201ENSMUST00000218421 305 ntBASIC14.12□□□□□ -0.15
Syne4Q8CII8 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC14.12□□□□□ -0.15
Syne4Q8CII8 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Syne4Q8CII8 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Syne4Q8CII8 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Syne4Q8CII8 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.12□□□□□ -0.15
Syne4Q8CII8 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Syne4Q8CII8 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Syne4Q8CII8 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Syne4Q8CII8 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Syne4Q8CII8 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
Syne4Q8CII8 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.12□□□□□ -0.15
Syne4Q8CII8 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Syne4Q8CII8 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Syne4Q8CII8 Gm43721-201ENSMUST00000199677 2313 ntBASIC14.12□□□□□ -0.15
Syne4Q8CII8 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Syne4Q8CII8 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Syne4Q8CII8 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.11□□□□□ -0.15
Syne4Q8CII8 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Syne4Q8CII8 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Syne4Q8CII8 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Syne4Q8CII8 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Syne4Q8CII8 Gm13809-201ENSMUST00000117921 597 ntBASIC14.11□□□□□ -0.15
Syne4Q8CII8 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC14.11□□□□□ -0.15
Syne4Q8CII8 Gm14314-201ENSMUST00000118225 1015 ntBASIC14.11□□□□□ -0.15
Syne4Q8CII8 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC14.11□□□□□ -0.15
Syne4Q8CII8 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC14.11□□□□□ -0.15
Syne4Q8CII8 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms