Protein–RNA interactions for Protein: Q8CGP4

Hist1h2aa, Histone H2A, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2aaQ8CGP4 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hist1h2aaQ8CGP4 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hist1h2aaQ8CGP4 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hist1h2aaQ8CGP4 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hist1h2aaQ8CGP4 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.82□□□□□ -0.52
Hist1h2aaQ8CGP4 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.82□□□□□ -0.52
Hist1h2aaQ8CGP4 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Hist1h2aaQ8CGP4 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hist1h2aaQ8CGP4 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hist1h2aaQ8CGP4 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h2aaQ8CGP4 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h2aaQ8CGP4 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h2aaQ8CGP4 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h2aaQ8CGP4 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.81□□□□□ -0.52
Hist1h2aaQ8CGP4 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h2aaQ8CGP4 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h2aaQ8CGP4 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h2aaQ8CGP4 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.81□□□□□ -0.52
Hist1h2aaQ8CGP4 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h2aaQ8CGP4 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h2aaQ8CGP4 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.81□□□□□ -0.52
Hist1h2aaQ8CGP4 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h2aaQ8CGP4 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h2aaQ8CGP4 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.81□□□□□ -0.52
Hist1h2aaQ8CGP4 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h2aaQ8CGP4 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h2aaQ8CGP4 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h2aaQ8CGP4 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h2aaQ8CGP4 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h2aaQ8CGP4 Gm14660-201ENSMUST00000119809 575 ntBASIC11.81□□□□□ -0.52
Hist1h2aaQ8CGP4 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.81□□□□□ -0.52
Hist1h2aaQ8CGP4 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h2aaQ8CGP4 Gm16379-201ENSMUST00000161469 348 ntBASIC11.81□□□□□ -0.52
Hist1h2aaQ8CGP4 Gm25927-201ENSMUST00000175058 117 ntBASIC11.81□□□□□ -0.52
Hist1h2aaQ8CGP4 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Hist1h2aaQ8CGP4 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Hist1h2aaQ8CGP4 Gm8762-201ENSMUST00000193486 339 ntBASIC11.81□□□□□ -0.52
Hist1h2aaQ8CGP4 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h2aaQ8CGP4 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.81□□□□□ -0.52
Hist1h2aaQ8CGP4 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h2aaQ8CGP4 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
Hist1h2aaQ8CGP4 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.81□□□□□ -0.52
Hist1h2aaQ8CGP4 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.81□□□□□ -0.52
Hist1h2aaQ8CGP4 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h2aaQ8CGP4 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Hist1h2aaQ8CGP4 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h2aaQ8CGP4 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h2aaQ8CGP4 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h2aaQ8CGP4 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h2aaQ8CGP4 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h2aaQ8CGP4 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Hist1h2aaQ8CGP4 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h2aaQ8CGP4 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h2aaQ8CGP4 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h2aaQ8CGP4 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h2aaQ8CGP4 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hist1h2aaQ8CGP4 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Hist1h2aaQ8CGP4 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h2aaQ8CGP4 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Hist1h2aaQ8CGP4 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h2aaQ8CGP4 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h2aaQ8CGP4 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h2aaQ8CGP4 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h2aaQ8CGP4 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Hist1h2aaQ8CGP4 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h2aaQ8CGP4 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Hist1h2aaQ8CGP4 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h2aaQ8CGP4 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h2aaQ8CGP4 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.8□□□□□ -0.52
Hist1h2aaQ8CGP4 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Hist1h2aaQ8CGP4 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.8□□□□□ -0.52
Hist1h2aaQ8CGP4 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.8□□□□□ -0.52
Hist1h2aaQ8CGP4 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.8□□□□□ -0.52
Hist1h2aaQ8CGP4 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h2aaQ8CGP4 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h2aaQ8CGP4 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Hist1h2aaQ8CGP4 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h2aaQ8CGP4 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.8□□□□□ -0.52
Hist1h2aaQ8CGP4 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h2aaQ8CGP4 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h2aaQ8CGP4 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Hist1h2aaQ8CGP4 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hist1h2aaQ8CGP4 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Hist1h2aaQ8CGP4 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hist1h2aaQ8CGP4 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hist1h2aaQ8CGP4 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hist1h2aaQ8CGP4 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hist1h2aaQ8CGP4 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.79□□□□□ -0.52
Hist1h2aaQ8CGP4 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hist1h2aaQ8CGP4 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hist1h2aaQ8CGP4 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hist1h2aaQ8CGP4 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hist1h2aaQ8CGP4 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.79□□□□□ -0.52
Hist1h2aaQ8CGP4 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hist1h2aaQ8CGP4 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hist1h2aaQ8CGP4 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hist1h2aaQ8CGP4 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Hist1h2aaQ8CGP4 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.79□□□□□ -0.52
Hist1h2aaQ8CGP4 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.79□□□□□ -0.52
Hist1h2aaQ8CGP4 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms