Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc28aQ8CEI3 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc28aQ8CEI3 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ccdc28aQ8CEI3 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc28aQ8CEI3 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Ccdc28aQ8CEI3 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc28aQ8CEI3 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Ccdc28aQ8CEI3 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC13.2□□□□□ -0.3
Ccdc28aQ8CEI3 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.2□□□□□ -0.3
Ccdc28aQ8CEI3 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc28aQ8CEI3 Gm13612-201ENSMUST00000119276 390 ntBASIC13.2□□□□□ -0.3
Ccdc28aQ8CEI3 Gm11637-201ENSMUST00000120601 592 ntBASIC13.2□□□□□ -0.3
Ccdc28aQ8CEI3 Gm16479-201ENSMUST00000121706 932 ntBASIC13.2□□□□□ -0.3
Ccdc28aQ8CEI3 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ccdc28aQ8CEI3 Gm26185-201ENSMUST00000157692 266 ntBASIC13.2□□□□□ -0.3
Ccdc28aQ8CEI3 Gm17208-201ENSMUST00000168388 535 ntBASIC13.2□□□□□ -0.3
Ccdc28aQ8CEI3 Gm37922-201ENSMUST00000195596 455 ntBASIC13.2□□□□□ -0.3
Ccdc28aQ8CEI3 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.2□□□□□ -0.3
Ccdc28aQ8CEI3 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.2□□□□□ -0.3
Ccdc28aQ8CEI3 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Ccdc28aQ8CEI3 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.2□□□□□ -0.3
Ccdc28aQ8CEI3 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc28aQ8CEI3 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Ccdc28aQ8CEI3 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc28aQ8CEI3 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc28aQ8CEI3 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc28aQ8CEI3 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc28aQ8CEI3 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Ccdc28aQ8CEI3 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.2□□□□□ -0.3
Ccdc28aQ8CEI3 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc28aQ8CEI3 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc28aQ8CEI3 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc28aQ8CEI3 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc28aQ8CEI3 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ccdc28aQ8CEI3 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc28aQ8CEI3 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc28aQ8CEI3 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.19□□□□□ -0.3
Ccdc28aQ8CEI3 Map1b-203ENSMUST00000223725 2669 ntBASIC13.19□□□□□ -0.3
Ccdc28aQ8CEI3 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ccdc28aQ8CEI3 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc28aQ8CEI3 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Ccdc28aQ8CEI3 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc28aQ8CEI3 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc28aQ8CEI3 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc28aQ8CEI3 Gm2238-201ENSMUST00000192074 3669 ntBASIC13.19□□□□□ -0.3
Ccdc28aQ8CEI3 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc28aQ8CEI3 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc28aQ8CEI3 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc28aQ8CEI3 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.19□□□□□ -0.3
Ccdc28aQ8CEI3 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.19□□□□□ -0.3
Ccdc28aQ8CEI3 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ccdc28aQ8CEI3 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc28aQ8CEI3 Gm12859-201ENSMUST00000117834 427 ntBASIC13.19□□□□□ -0.3
Ccdc28aQ8CEI3 Gm8213-201ENSMUST00000118191 441 ntBASIC13.19□□□□□ -0.3
Ccdc28aQ8CEI3 Gm12384-201ENSMUST00000119228 919 ntBASIC13.19□□□□□ -0.3
Ccdc28aQ8CEI3 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc28aQ8CEI3 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Ccdc28aQ8CEI3 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
Ccdc28aQ8CEI3 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc28aQ8CEI3 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.19□□□□□ -0.3
Ccdc28aQ8CEI3 Gm37042-201ENSMUST00000193816 581 ntBASIC13.19□□□□□ -0.3
Ccdc28aQ8CEI3 Gm35960-201ENSMUST00000202712 767 ntBASIC13.19□□□□□ -0.3
Ccdc28aQ8CEI3 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.19□□□□□ -0.3
Ccdc28aQ8CEI3 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.19□□□□□ -0.3
Ccdc28aQ8CEI3 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc28aQ8CEI3 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc28aQ8CEI3 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC13.19□□□□□ -0.3
Ccdc28aQ8CEI3 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc28aQ8CEI3 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc28aQ8CEI3 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc28aQ8CEI3 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc28aQ8CEI3 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ccdc28aQ8CEI3 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc28aQ8CEI3 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc28aQ8CEI3 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Ccdc28aQ8CEI3 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc28aQ8CEI3 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc28aQ8CEI3 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc28aQ8CEI3 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc28aQ8CEI3 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
Ccdc28aQ8CEI3 Gm43727-201ENSMUST00000198021 2647 ntBASIC13.18□□□□□ -0.3
Ccdc28aQ8CEI3 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc28aQ8CEI3 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc28aQ8CEI3 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ccdc28aQ8CEI3 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC13.18□□□□□ -0.3
Ccdc28aQ8CEI3 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc28aQ8CEI3 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc28aQ8CEI3 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.18□□□□□ -0.3
Ccdc28aQ8CEI3 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.18□□□□□ -0.3
Ccdc28aQ8CEI3 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.18□□□□□ -0.3
Ccdc28aQ8CEI3 Gm16296-201ENSMUST00000159905 325 ntBASIC13.18□□□□□ -0.3
Ccdc28aQ8CEI3 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.18□□□□□ -0.3
Ccdc28aQ8CEI3 Gm8598-201ENSMUST00000221184 836 ntBASIC13.18□□□□□ -0.3
Ccdc28aQ8CEI3 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc28aQ8CEI3 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc28aQ8CEI3 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc28aQ8CEI3 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.18□□□□□ -0.3
Ccdc28aQ8CEI3 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc28aQ8CEI3 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc28aQ8CEI3 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms