Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.2□□□□□ -0.3
Uba3Q8C878 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Uba3Q8C878 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Uba3Q8C878 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Uba3Q8C878 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Uba3Q8C878 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Uba3Q8C878 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Uba3Q8C878 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Uba3Q8C878 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Uba3Q8C878 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.2□□□□□ -0.3
Uba3Q8C878 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC13.2□□□□□ -0.3
Uba3Q8C878 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Uba3Q8C878 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.2□□□□□ -0.3
Uba3Q8C878 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Uba3Q8C878 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.2□□□□□ -0.3
Uba3Q8C878 Morn2-202ENSMUST00000227729 656 ntBASIC13.2□□□□□ -0.3
Uba3Q8C878 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.2□□□□□ -0.3
Uba3Q8C878 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Uba3Q8C878 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Uba3Q8C878 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Uba3Q8C878 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Uba3Q8C878 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.2□□□□□ -0.3
Uba3Q8C878 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Uba3Q8C878 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Uba3Q8C878 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.2□□□□□ -0.3
Uba3Q8C878 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Uba3Q8C878 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Uba3Q8C878 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Uba3Q8C878 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Uba3Q8C878 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Uba3Q8C878 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Uba3Q8C878 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Uba3Q8C878 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Uba3Q8C878 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Uba3Q8C878 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Uba3Q8C878 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Uba3Q8C878 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Uba3Q8C878 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Uba3Q8C878 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Uba3Q8C878 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Uba3Q8C878 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Uba3Q8C878 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Uba3Q8C878 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Uba3Q8C878 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Uba3Q8C878 Gm14760-201ENSMUST00000121831 999 ntBASIC13.19□□□□□ -0.3
Uba3Q8C878 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Uba3Q8C878 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.19□□□□□ -0.3
Uba3Q8C878 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.19□□□□□ -0.3
Uba3Q8C878 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Uba3Q8C878 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Uba3Q8C878 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Uba3Q8C878 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Uba3Q8C878 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Uba3Q8C878 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Uba3Q8C878 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Uba3Q8C878 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Uba3Q8C878 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.19□□□□□ -0.3
Uba3Q8C878 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Uba3Q8C878 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.19□□□□□ -0.3
Uba3Q8C878 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Uba3Q8C878 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Uba3Q8C878 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Uba3Q8C878 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Uba3Q8C878 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Uba3Q8C878 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC13.19□□□□□ -0.3
Uba3Q8C878 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Uba3Q8C878 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Uba3Q8C878 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Uba3Q8C878 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Uba3Q8C878 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC13.18□□□□□ -0.3
Uba3Q8C878 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Uba3Q8C878 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Uba3Q8C878 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Uba3Q8C878 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Uba3Q8C878 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.18□□□□□ -0.3
Uba3Q8C878 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Uba3Q8C878 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC13.18□□□□□ -0.3
Uba3Q8C878 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Uba3Q8C878 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Uba3Q8C878 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Uba3Q8C878 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Uba3Q8C878 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Uba3Q8C878 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Uba3Q8C878 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Uba3Q8C878 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Uba3Q8C878 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Uba3Q8C878 Gm12058-201ENSMUST00000118614 437 ntBASIC13.18□□□□□ -0.3
Uba3Q8C878 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Uba3Q8C878 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.18□□□□□ -0.3
Uba3Q8C878 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.18□□□□□ -0.3
Uba3Q8C878 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.18□□□□□ -0.3
Uba3Q8C878 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
Uba3Q8C878 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC13.18□□□□□ -0.3
Uba3Q8C878 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.18□□□□□ -0.3
Uba3Q8C878 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.18□□□□□ -0.3
Uba3Q8C878 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.18□□□□□ -0.3
Uba3Q8C878 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Uba3Q8C878 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.18□□□□□ -0.3
Uba3Q8C878 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.18□□□□□ -0.3
Uba3Q8C878 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms