Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.3□□□□□ -0.6
Col6a6Q8C6K9 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a6Q8C6K9 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a6Q8C6K9 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a6Q8C6K9 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a6Q8C6K9 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Col6a6Q8C6K9 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.3□□□□□ -0.6
Col6a6Q8C6K9 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a6Q8C6K9 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a6Q8C6K9 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Col6a6Q8C6K9 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a6Q8C6K9 Mir7221-201ENSMUST00000184009 72 ntBASIC11.3□□□□□ -0.6
Col6a6Q8C6K9 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Col6a6Q8C6K9 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.3□□□□□ -0.6
Col6a6Q8C6K9 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a6Q8C6K9 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.3□□□□□ -0.6
Col6a6Q8C6K9 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a6Q8C6K9 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a6Q8C6K9 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a6Q8C6K9 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.3□□□□□ -0.6
Col6a6Q8C6K9 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Col6a6Q8C6K9 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a6Q8C6K9 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC11.29□□□□□ -0.6
Col6a6Q8C6K9 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a6Q8C6K9 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a6Q8C6K9 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a6Q8C6K9 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Col6a6Q8C6K9 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a6Q8C6K9 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a6Q8C6K9 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.29□□□□□ -0.6
Col6a6Q8C6K9 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.29□□□□□ -0.6
Col6a6Q8C6K9 Gm42937-201ENSMUST00000197360 752 ntBASIC11.29□□□□□ -0.6
Col6a6Q8C6K9 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC11.29□□□□□ -0.6
Col6a6Q8C6K9 Gm43962-201ENSMUST00000203898 190 ntBASIC11.29□□□□□ -0.6
Col6a6Q8C6K9 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a6Q8C6K9 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.29□□□□□ -0.6
Col6a6Q8C6K9 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Col6a6Q8C6K9 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a6Q8C6K9 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a6Q8C6K9 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.29□□□□□ -0.6
Col6a6Q8C6K9 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a6Q8C6K9 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a6Q8C6K9 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a6Q8C6K9 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.29□□□□□ -0.6
Col6a6Q8C6K9 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a6Q8C6K9 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a6Q8C6K9 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a6Q8C6K9 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Col6a6Q8C6K9 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a6Q8C6K9 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a6Q8C6K9 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Col6a6Q8C6K9 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.29□□□□□ -0.6
Col6a6Q8C6K9 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.29□□□□□ -0.6
Col6a6Q8C6K9 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.29□□□□□ -0.6
Col6a6Q8C6K9 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.29□□□□□ -0.6
Col6a6Q8C6K9 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a6Q8C6K9 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Col6a6Q8C6K9 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a6Q8C6K9 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.29□□□□□ -0.6
Col6a6Q8C6K9 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a6Q8C6K9 Gm13888-201ENSMUST00000119148 422 ntBASIC11.29□□□□□ -0.6
Col6a6Q8C6K9 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC11.29□□□□□ -0.6
Col6a6Q8C6K9 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.29□□□□□ -0.6
Col6a6Q8C6K9 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC11.29□□□□□ -0.6
Col6a6Q8C6K9 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a6Q8C6K9 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a6Q8C6K9 Gm3332-201ENSMUST00000189337 928 ntBASIC11.29□□□□□ -0.6
Col6a6Q8C6K9 Gm6781-201ENSMUST00000038304 1242 ntBASIC11.29□□□□□ -0.6
Col6a6Q8C6K9 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a6Q8C6K9 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a6Q8C6K9 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Col6a6Q8C6K9 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a6Q8C6K9 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Col6a6Q8C6K9 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a6Q8C6K9 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.28□□□□□ -0.6
Col6a6Q8C6K9 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a6Q8C6K9 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Col6a6Q8C6K9 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a6Q8C6K9 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a6Q8C6K9 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Col6a6Q8C6K9 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a6Q8C6K9 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC11.28□□□□□ -0.6
Col6a6Q8C6K9 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a6Q8C6K9 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a6Q8C6K9 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a6Q8C6K9 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.28□□□□□ -0.6
Col6a6Q8C6K9 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Col6a6Q8C6K9 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.28□□□□□ -0.6
Col6a6Q8C6K9 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.28□□□□□ -0.6
Col6a6Q8C6K9 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC11.28□□□□□ -0.6
Col6a6Q8C6K9 Gm19187-201ENSMUST00000206781 892 ntBASIC11.28□□□□□ -0.6
Col6a6Q8C6K9 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a6Q8C6K9 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.28□□□□□ -0.6
Col6a6Q8C6K9 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a6Q8C6K9 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Col6a6Q8C6K9 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a6Q8C6K9 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a6Q8C6K9 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a6Q8C6K9 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.28□□□□□ -0.6
Col6a6Q8C6K9 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 493.9 ms