Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.91□□□□□ -0.18
Trim47Q8C0E3 Gm42726-201ENSMUST00000202274 1286 ntTSL 5 BASIC13.91□□□□□ -0.18
Trim47Q8C0E3 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim47Q8C0E3 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trim47Q8C0E3 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim47Q8C0E3 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim47Q8C0E3 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim47Q8C0E3 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim47Q8C0E3 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim47Q8C0E3 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Trim47Q8C0E3 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim47Q8C0E3 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim47Q8C0E3 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim47Q8C0E3 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trim47Q8C0E3 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trim47Q8C0E3 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim47Q8C0E3 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trim47Q8C0E3 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trim47Q8C0E3 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim47Q8C0E3 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim47Q8C0E3 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim47Q8C0E3 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.9□□□□□ -0.18
Trim47Q8C0E3 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim47Q8C0E3 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trim47Q8C0E3 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim47Q8C0E3 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim47Q8C0E3 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim47Q8C0E3 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim47Q8C0E3 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim47Q8C0E3 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim47Q8C0E3 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trim47Q8C0E3 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Trim47Q8C0E3 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim47Q8C0E3 Gm15547-201ENSMUST00000122152 333 ntBASIC13.9□□□□□ -0.18
Trim47Q8C0E3 Gm25668-201ENSMUST00000157700 129 ntBASIC13.9□□□□□ -0.18
Trim47Q8C0E3 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim47Q8C0E3 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim47Q8C0E3 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.9□□□□□ -0.18
Trim47Q8C0E3 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC13.9□□□□□ -0.18
Trim47Q8C0E3 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim47Q8C0E3 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim47Q8C0E3 Gm26035-201ENSMUST00000083065 308 ntBASIC13.9□□□□□ -0.18
Trim47Q8C0E3 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trim47Q8C0E3 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim47Q8C0E3 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.9□□□□□ -0.18
Trim47Q8C0E3 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim47Q8C0E3 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim47Q8C0E3 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim47Q8C0E3 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trim47Q8C0E3 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim47Q8C0E3 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim47Q8C0E3 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim47Q8C0E3 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trim47Q8C0E3 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim47Q8C0E3 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim47Q8C0E3 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim47Q8C0E3 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim47Q8C0E3 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim47Q8C0E3 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim47Q8C0E3 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.9□□□□□ -0.18
Trim47Q8C0E3 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
Trim47Q8C0E3 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trim47Q8C0E3 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim47Q8C0E3 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Trim47Q8C0E3 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim47Q8C0E3 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim47Q8C0E3 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim47Q8C0E3 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
Trim47Q8C0E3 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.89□□□□□ -0.19
Trim47Q8C0E3 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim47Q8C0E3 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim47Q8C0E3 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Trim47Q8C0E3 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.89□□□□□ -0.19
Trim47Q8C0E3 Gm14832-201ENSMUST00000121289 322 ntBASIC13.89□□□□□ -0.19
Trim47Q8C0E3 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim47Q8C0E3 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim47Q8C0E3 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim47Q8C0E3 Gm28882-201ENSMUST00000185504 314 ntBASIC13.89□□□□□ -0.19
Trim47Q8C0E3 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim47Q8C0E3 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC13.89□□□□□ -0.19
Trim47Q8C0E3 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.89□□□□□ -0.19
Trim47Q8C0E3 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim47Q8C0E3 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim47Q8C0E3 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim47Q8C0E3 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim47Q8C0E3 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim47Q8C0E3 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim47Q8C0E3 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim47Q8C0E3 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim47Q8C0E3 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim47Q8C0E3 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.89□□□□□ -0.19
Trim47Q8C0E3 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trim47Q8C0E3 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC13.88□□□□□ -0.19
Trim47Q8C0E3 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim47Q8C0E3 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.88□□□□□ -0.19
Trim47Q8C0E3 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim47Q8C0E3 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim47Q8C0E3 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim47Q8C0E3 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.88□□□□□ -0.19
Trim47Q8C0E3 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms