Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup54Q8BTS4 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup54Q8BTS4 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nup54Q8BTS4 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup54Q8BTS4 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup54Q8BTS4 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nup54Q8BTS4 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Nup54Q8BTS4 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup54Q8BTS4 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup54Q8BTS4 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup54Q8BTS4 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup54Q8BTS4 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup54Q8BTS4 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.82□□□□□ -0.36
Nup54Q8BTS4 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Nup54Q8BTS4 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nup54Q8BTS4 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.82□□□□□ -0.36
Nup54Q8BTS4 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.82□□□□□ -0.36
Nup54Q8BTS4 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup54Q8BTS4 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup54Q8BTS4 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup54Q8BTS4 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup54Q8BTS4 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup54Q8BTS4 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nup54Q8BTS4 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup54Q8BTS4 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Nup54Q8BTS4 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup54Q8BTS4 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup54Q8BTS4 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup54Q8BTS4 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup54Q8BTS4 Gm15547-201ENSMUST00000122152 333 ntBASIC12.82□□□□□ -0.36
Nup54Q8BTS4 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Nup54Q8BTS4 Gm24845-201ENSMUST00000158034 109 ntBASIC12.82□□□□□ -0.36
Nup54Q8BTS4 Gm23119-201ENSMUST00000158610 140 ntBASIC12.82□□□□□ -0.36
Nup54Q8BTS4 Gm20482-202ENSMUST00000174729 825 ntBASIC12.82□□□□□ -0.36
Nup54Q8BTS4 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Nup54Q8BTS4 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nup54Q8BTS4 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Nup54Q8BTS4 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.82□□□□□ -0.36
Nup54Q8BTS4 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.82□□□□□ -0.36
Nup54Q8BTS4 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nup54Q8BTS4 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup54Q8BTS4 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup54Q8BTS4 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Nup54Q8BTS4 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup54Q8BTS4 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup54Q8BTS4 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup54Q8BTS4 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nup54Q8BTS4 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup54Q8BTS4 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup54Q8BTS4 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup54Q8BTS4 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nup54Q8BTS4 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup54Q8BTS4 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup54Q8BTS4 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Gm11930-201ENSMUST00000117788 190 ntBASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Gm14832-201ENSMUST00000121289 322 ntBASIC12.81□□□□□ -0.36
Nup54Q8BTS4 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Gm27320-201ENSMUST00000184892 109 ntBASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms