Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Gm12291-201ENSMUST00000121627 311 ntBASIC13.33□□□□□ -0.28
Trim6Q8BGE7 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim6Q8BGE7 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim6Q8BGE7 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.33□□□□□ -0.28
Trim6Q8BGE7 Mir7654-201ENSMUST00000185082 70 ntBASIC13.33□□□□□ -0.28
Trim6Q8BGE7 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.33□□□□□ -0.28
Trim6Q8BGE7 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.33□□□□□ -0.28
Trim6Q8BGE7 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim6Q8BGE7 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.33□□□□□ -0.28
Trim6Q8BGE7 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trim6Q8BGE7 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trim6Q8BGE7 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.33□□□□□ -0.28
Trim6Q8BGE7 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim6Q8BGE7 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim6Q8BGE7 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim6Q8BGE7 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.33□□□□□ -0.28
Trim6Q8BGE7 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim6Q8BGE7 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Trim6Q8BGE7 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim6Q8BGE7 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim6Q8BGE7 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim6Q8BGE7 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim6Q8BGE7 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim6Q8BGE7 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim6Q8BGE7 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim6Q8BGE7 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim6Q8BGE7 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim6Q8BGE7 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim6Q8BGE7 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim6Q8BGE7 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim6Q8BGE7 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim6Q8BGE7 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim6Q8BGE7 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim6Q8BGE7 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim6Q8BGE7 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Trim6Q8BGE7 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim6Q8BGE7 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trim6Q8BGE7 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim6Q8BGE7 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim6Q8BGE7 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim6Q8BGE7 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Trim6Q8BGE7 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim6Q8BGE7 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.32□□□□□ -0.28
Trim6Q8BGE7 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim6Q8BGE7 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim6Q8BGE7 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.32□□□□□ -0.28
Trim6Q8BGE7 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim6Q8BGE7 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim6Q8BGE7 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.32□□□□□ -0.28
Trim6Q8BGE7 Gm7063-201ENSMUST00000186840 981 ntBASIC13.32□□□□□ -0.28
Trim6Q8BGE7 Gm19087-201ENSMUST00000191430 946 ntBASIC13.32□□□□□ -0.28
Trim6Q8BGE7 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim6Q8BGE7 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim6Q8BGE7 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim6Q8BGE7 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim6Q8BGE7 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim6Q8BGE7 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trim6Q8BGE7 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trim6Q8BGE7 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim6Q8BGE7 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim6Q8BGE7 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim6Q8BGE7 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim6Q8BGE7 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim6Q8BGE7 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim6Q8BGE7 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim6Q8BGE7 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim6Q8BGE7 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim6Q8BGE7 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim6Q8BGE7 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.32□□□□□ -0.28
Trim6Q8BGE7 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Trim6Q8BGE7 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trim6Q8BGE7 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim6Q8BGE7 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim6Q8BGE7 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim6Q8BGE7 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim6Q8BGE7 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim6Q8BGE7 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.31□□□□□ -0.28
Trim6Q8BGE7 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim6Q8BGE7 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim6Q8BGE7 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim6Q8BGE7 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Trim6Q8BGE7 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim6Q8BGE7 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC13.31□□□□□ -0.28
Trim6Q8BGE7 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim6Q8BGE7 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim6Q8BGE7 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Trim6Q8BGE7 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trim6Q8BGE7 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.31□□□□□ -0.28
Trim6Q8BGE7 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trim6Q8BGE7 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Trim6Q8BGE7 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trim6Q8BGE7 Gm28693-202ENSMUST00000190758 331 ntBASIC13.31□□□□□ -0.28
Trim6Q8BGE7 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.31□□□□□ -0.28
Trim6Q8BGE7 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.31□□□□□ -0.28
Trim6Q8BGE7 Gm44855-201ENSMUST00000205725 362 ntBASIC13.31□□□□□ -0.28
Trim6Q8BGE7 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.31□□□□□ -0.28
Trim6Q8BGE7 Gm18473-201ENSMUST00000220543 868 ntBASIC13.31□□□□□ -0.28
Trim6Q8BGE7 AC156031.2-201ENSMUST00000213107 3310 ntBASIC13.31□□□□□ -0.28
Trim6Q8BGE7 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim6Q8BGE7 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms