Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.44□□□□□ -0.26
Trim65Q8BFW4 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim65Q8BFW4 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
Trim65Q8BFW4 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.44□□□□□ -0.26
Trim65Q8BFW4 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim65Q8BFW4 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim65Q8BFW4 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trim65Q8BFW4 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim65Q8BFW4 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim65Q8BFW4 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.43□□□□□ -0.26
Trim65Q8BFW4 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim65Q8BFW4 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trim65Q8BFW4 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim65Q8BFW4 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.43□□□□□ -0.26
Trim65Q8BFW4 Gm5187-201ENSMUST00000117317 991 ntBASIC13.43□□□□□ -0.26
Trim65Q8BFW4 Gm12742-201ENSMUST00000117326 410 ntBASIC13.43□□□□□ -0.26
Trim65Q8BFW4 Gm11597-201ENSMUST00000121423 964 ntBASIC13.43□□□□□ -0.26
Trim65Q8BFW4 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.43□□□□□ -0.26
Trim65Q8BFW4 Gm24548-201ENSMUST00000158650 108 ntBASIC13.43□□□□□ -0.26
Trim65Q8BFW4 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Trim65Q8BFW4 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.43□□□□□ -0.26
Trim65Q8BFW4 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.43□□□□□ -0.26
Trim65Q8BFW4 Gm44405-201ENSMUST00000198952 126 ntBASIC13.43□□□□□ -0.26
Trim65Q8BFW4 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.43□□□□□ -0.26
Trim65Q8BFW4 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim65Q8BFW4 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.43□□□□□ -0.26
Trim65Q8BFW4 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.43□□□□□ -0.26
Trim65Q8BFW4 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim65Q8BFW4 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim65Q8BFW4 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Trim65Q8BFW4 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim65Q8BFW4 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trim65Q8BFW4 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim65Q8BFW4 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.43□□□□□ -0.26
Trim65Q8BFW4 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trim65Q8BFW4 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim65Q8BFW4 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim65Q8BFW4 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim65Q8BFW4 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim65Q8BFW4 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim65Q8BFW4 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim65Q8BFW4 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim65Q8BFW4 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim65Q8BFW4 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.42□□□□□ -0.26
Trim65Q8BFW4 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim65Q8BFW4 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim65Q8BFW4 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim65Q8BFW4 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim65Q8BFW4 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim65Q8BFW4 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trim65Q8BFW4 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim65Q8BFW4 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.42□□□□□ -0.26
Trim65Q8BFW4 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.42□□□□□ -0.26
Trim65Q8BFW4 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim65Q8BFW4 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim65Q8BFW4 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.42□□□□□ -0.26
Trim65Q8BFW4 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trim65Q8BFW4 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim65Q8BFW4 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim65Q8BFW4 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim65Q8BFW4 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.42□□□□□ -0.26
Trim65Q8BFW4 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim65Q8BFW4 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim65Q8BFW4 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim65Q8BFW4 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim65Q8BFW4 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim65Q8BFW4 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim65Q8BFW4 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim65Q8BFW4 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trim65Q8BFW4 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim65Q8BFW4 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC13.42□□□□□ -0.26
Trim65Q8BFW4 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.42□□□□□ -0.26
Trim65Q8BFW4 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim65Q8BFW4 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim65Q8BFW4 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim65Q8BFW4 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim65Q8BFW4 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim65Q8BFW4 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim65Q8BFW4 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trim65Q8BFW4 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim65Q8BFW4 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.41□□□□□ -0.26
Trim65Q8BFW4 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim65Q8BFW4 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim65Q8BFW4 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.41□□□□□ -0.26
Trim65Q8BFW4 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim65Q8BFW4 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim65Q8BFW4 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim65Q8BFW4 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trim65Q8BFW4 Gm13315-201ENSMUST00000120376 991 ntBASIC13.41□□□□□ -0.26
Trim65Q8BFW4 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim65Q8BFW4 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.41□□□□□ -0.26
Trim65Q8BFW4 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.41□□□□□ -0.26
Trim65Q8BFW4 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim65Q8BFW4 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.41□□□□□ -0.26
Trim65Q8BFW4 Gm9022-201ENSMUST00000182482 992 ntBASIC13.41□□□□□ -0.26
Trim65Q8BFW4 Gm37424-201ENSMUST00000191727 561 ntBASIC13.41□□□□□ -0.26
Trim65Q8BFW4 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.41□□□□□ -0.26
Trim65Q8BFW4 Gm19184-201ENSMUST00000196798 928 ntBASIC13.41□□□□□ -0.26
Trim65Q8BFW4 Gm44124-201ENSMUST00000204159 472 ntBASIC13.41□□□□□ -0.26
Trim65Q8BFW4 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms