Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ubp1Q811S7 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ubp1Q811S7 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ubp1Q811S7 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ubp1Q811S7 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ubp1Q811S7 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ubp1Q811S7 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.41□□□□□ -0.42
Ubp1Q811S7 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.41□□□□□ -0.42
Ubp1Q811S7 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Ubp1Q811S7 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.41□□□□□ -0.42
Ubp1Q811S7 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ubp1Q811S7 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Ubp1Q811S7 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ubp1Q811S7 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ubp1Q811S7 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ubp1Q811S7 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ubp1Q811S7 Gm16296-201ENSMUST00000159905 325 ntBASIC12.41□□□□□ -0.42
Ubp1Q811S7 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Ubp1Q811S7 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.41□□□□□ -0.42
Ubp1Q811S7 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.41□□□□□ -0.42
Ubp1Q811S7 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.41□□□□□ -0.42
Ubp1Q811S7 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ubp1Q811S7 Gm10046-201ENSMUST00000208208 632 ntTSL 2 BASIC12.41□□□□□ -0.42
Ubp1Q811S7 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.41□□□□□ -0.42
Ubp1Q811S7 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ubp1Q811S7 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ubp1Q811S7 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ubp1Q811S7 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ubp1Q811S7 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ubp1Q811S7 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ubp1Q811S7 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ubp1Q811S7 Gm22058-201ENSMUST00000083393 310 ntBASIC12.41□□□□□ -0.42
Ubp1Q811S7 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ubp1Q811S7 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ubp1Q811S7 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.41□□□□□ -0.42
Ubp1Q811S7 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ubp1Q811S7 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.41□□□□□ -0.42
Ubp1Q811S7 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ubp1Q811S7 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ubp1Q811S7 Daam2-202ENSMUST00000224595 1926 ntBASIC12.41□□□□□ -0.42
Ubp1Q811S7 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ubp1Q811S7 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ubp1Q811S7 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ubp1Q811S7 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ubp1Q811S7 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ubp1Q811S7 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ubp1Q811S7 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ubp1Q811S7 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.4□□□□□ -0.42
Ubp1Q811S7 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ubp1Q811S7 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ubp1Q811S7 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.4□□□□□ -0.42
Ubp1Q811S7 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ubp1Q811S7 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ubp1Q811S7 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ubp1Q811S7 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ubp1Q811S7 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ubp1Q811S7 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ubp1Q811S7 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ubp1Q811S7 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ubp1Q811S7 Gm13492-201ENSMUST00000119772 665 ntBASIC12.4□□□□□ -0.42
Ubp1Q811S7 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.4□□□□□ -0.42
Ubp1Q811S7 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ubp1Q811S7 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ubp1Q811S7 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.4□□□□□ -0.42
Ubp1Q811S7 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.4□□□□□ -0.42
Ubp1Q811S7 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ubp1Q811S7 Gm28923-201ENSMUST00000187755 322 ntBASIC12.4□□□□□ -0.42
Ubp1Q811S7 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ubp1Q811S7 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.4□□□□□ -0.42
Ubp1Q811S7 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Ubp1Q811S7 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ubp1Q811S7 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ubp1Q811S7 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Ubp1Q811S7 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ubp1Q811S7 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ubp1Q811S7 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.4□□□□□ -0.42
Ubp1Q811S7 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ubp1Q811S7 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ubp1Q811S7 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ubp1Q811S7 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ubp1Q811S7 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ubp1Q811S7 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.4□□□□□ -0.42
Ubp1Q811S7 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ubp1Q811S7 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ubp1Q811S7 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ubp1Q811S7 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ubp1Q811S7 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ubp1Q811S7 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ubp1Q811S7 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Ubp1Q811S7 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ubp1Q811S7 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.4□□□□□ -0.43
Ubp1Q811S7 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Ubp1Q811S7 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ubp1Q811S7 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.39□□□□□ -0.43
Ubp1Q811S7 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Ubp1Q811S7 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ubp1Q811S7 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ubp1Q811S7 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.39□□□□□ -0.43
Ubp1Q811S7 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.39□□□□□ -0.43
Ubp1Q811S7 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms