Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nucks1Q80XU3 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Nucks1Q80XU3 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nucks1Q80XU3 Gm11478-201ENSMUST00000117851 599 ntBASIC13.39□□□□□ -0.27
Nucks1Q80XU3 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.39□□□□□ -0.27
Nucks1Q80XU3 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.39□□□□□ -0.27
Nucks1Q80XU3 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.39□□□□□ -0.27
Nucks1Q80XU3 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nucks1Q80XU3 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Nucks1Q80XU3 Gm29649-201ENSMUST00000185649 419 ntBASIC13.39□□□□□ -0.27
Nucks1Q80XU3 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.39□□□□□ -0.27
Nucks1Q80XU3 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nucks1Q80XU3 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Nucks1Q80XU3 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nucks1Q80XU3 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Nucks1Q80XU3 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nucks1Q80XU3 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nucks1Q80XU3 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nucks1Q80XU3 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.39□□□□□ -0.27
Nucks1Q80XU3 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nucks1Q80XU3 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nucks1Q80XU3 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Nucks1Q80XU3 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nucks1Q80XU3 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nucks1Q80XU3 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.39□□□□□ -0.27
Nucks1Q80XU3 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Nucks1Q80XU3 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nucks1Q80XU3 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.39□□□□□ -0.27
Nucks1Q80XU3 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nucks1Q80XU3 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nucks1Q80XU3 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.38□□□□□ -0.27
Nucks1Q80XU3 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nucks1Q80XU3 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nucks1Q80XU3 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nucks1Q80XU3 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nucks1Q80XU3 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nucks1Q80XU3 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nucks1Q80XU3 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nucks1Q80XU3 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nucks1Q80XU3 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nucks1Q80XU3 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.38□□□□□ -0.27
Nucks1Q80XU3 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.38□□□□□ -0.27
Nucks1Q80XU3 Rmrp-201ENSMUST00000157463 271 ntBASIC13.38□□□□□ -0.27
Nucks1Q80XU3 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nucks1Q80XU3 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.38□□□□□ -0.27
Nucks1Q80XU3 Gm38092-201ENSMUST00000195600 653 ntBASIC13.38□□□□□ -0.27
Nucks1Q80XU3 Gm7561-201ENSMUST00000211203 886 ntBASIC13.38□□□□□ -0.27
Nucks1Q80XU3 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nucks1Q80XU3 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.38□□□□□ -0.27
Nucks1Q80XU3 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nucks1Q80XU3 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nucks1Q80XU3 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nucks1Q80XU3 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nucks1Q80XU3 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nucks1Q80XU3 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nucks1Q80XU3 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nucks1Q80XU3 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nucks1Q80XU3 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.38□□□□□ -0.27
Nucks1Q80XU3 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nucks1Q80XU3 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nucks1Q80XU3 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nucks1Q80XU3 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nucks1Q80XU3 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Nucks1Q80XU3 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.37□□□□□ -0.27
Nucks1Q80XU3 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Nucks1Q80XU3 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Nucks1Q80XU3 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nucks1Q80XU3 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nucks1Q80XU3 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Nucks1Q80XU3 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nucks1Q80XU3 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nucks1Q80XU3 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nucks1Q80XU3 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC13.37□□□□□ -0.27
Nucks1Q80XU3 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nucks1Q80XU3 Gm24231-201ENSMUST00000104315 133 ntBASIC13.37□□□□□ -0.27
Nucks1Q80XU3 Gm13492-201ENSMUST00000119772 665 ntBASIC13.37□□□□□ -0.27
Nucks1Q80XU3 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nucks1Q80XU3 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nucks1Q80XU3 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nucks1Q80XU3 Gm26927-201ENSMUST00000182385 965 ntBASIC13.37□□□□□ -0.27
Nucks1Q80XU3 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nucks1Q80XU3 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.37□□□□□ -0.27
Nucks1Q80XU3 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nucks1Q80XU3 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.37□□□□□ -0.27
Nucks1Q80XU3 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nucks1Q80XU3 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nucks1Q80XU3 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nucks1Q80XU3 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nucks1Q80XU3 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nucks1Q80XU3 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nucks1Q80XU3 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nucks1Q80XU3 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nucks1Q80XU3 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nucks1Q80XU3 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nucks1Q80XU3 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.37□□□□□ -0.27
Nucks1Q80XU3 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nucks1Q80XU3 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Nucks1Q80XU3 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nucks1Q80XU3 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nucks1Q80XU3 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms