Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Ccdc116Q80X53 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ccdc116Q80X53 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ccdc116Q80X53 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ccdc116Q80X53 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ccdc116Q80X53 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccdc116Q80X53 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccdc116Q80X53 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc116Q80X53 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc116Q80X53 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc116Q80X53 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc116Q80X53 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.29□□□□□ -0.44
Ccdc116Q80X53 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Ccdc116Q80X53 Gm11591-201ENSMUST00000120063 702 ntBASIC12.29□□□□□ -0.44
Ccdc116Q80X53 Gm11424-201ENSMUST00000121929 829 ntBASIC12.29□□□□□ -0.44
Ccdc116Q80X53 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccdc116Q80X53 Gm17150-201ENSMUST00000165577 381 ntBASIC12.29□□□□□ -0.44
Ccdc116Q80X53 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccdc116Q80X53 Gm8602-201ENSMUST00000184045 607 ntBASIC12.29□□□□□ -0.44
Ccdc116Q80X53 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc116Q80X53 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc116Q80X53 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc116Q80X53 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Ccdc116Q80X53 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ccdc116Q80X53 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.29□□□□□ -0.44
Ccdc116Q80X53 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc116Q80X53 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ccdc116Q80X53 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc116Q80X53 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc116Q80X53 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc116Q80X53 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc116Q80X53 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc116Q80X53 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc116Q80X53 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc116Q80X53 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc116Q80X53 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc116Q80X53 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc116Q80X53 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc116Q80X53 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc116Q80X53 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc116Q80X53 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc116Q80X53 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc116Q80X53 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccdc116Q80X53 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc116Q80X53 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc116Q80X53 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccdc116Q80X53 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc116Q80X53 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.28□□□□□ -0.44
Ccdc116Q80X53 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc116Q80X53 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc116Q80X53 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc116Q80X53 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc116Q80X53 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc116Q80X53 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc116Q80X53 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc116Q80X53 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.28□□□□□ -0.44
Ccdc116Q80X53 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc116Q80X53 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccdc116Q80X53 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.28□□□□□ -0.44
Ccdc116Q80X53 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.28□□□□□ -0.44
Ccdc116Q80X53 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc116Q80X53 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc116Q80X53 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.28□□□□□ -0.44
Ccdc116Q80X53 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.28□□□□□ -0.44
Ccdc116Q80X53 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc116Q80X53 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.28□□□□□ -0.44
Ccdc116Q80X53 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.28□□□□□ -0.44
Ccdc116Q80X53 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc116Q80X53 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc116Q80X53 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc116Q80X53 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc116Q80X53 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc116Q80X53 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.28□□□□□ -0.44
Ccdc116Q80X53 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.28□□□□□ -0.44
Ccdc116Q80X53 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc116Q80X53 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc116Q80X53 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc116Q80X53 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc116Q80X53 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc116Q80X53 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc116Q80X53 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc116Q80X53 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.27□□□□□ -0.44
Ccdc116Q80X53 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc116Q80X53 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Ccdc116Q80X53 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Ccdc116Q80X53 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
Ccdc116Q80X53 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc116Q80X53 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc116Q80X53 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc116Q80X53 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc116Q80X53 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Ccdc116Q80X53 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc116Q80X53 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc116Q80X53 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Ccdc116Q80X53 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.27□□□□□ -0.45
Ccdc116Q80X53 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc116Q80X53 Gm43818-201ENSMUST00000200605 466 ntBASIC12.27□□□□□ -0.45
Ccdc116Q80X53 Gm6266-201ENSMUST00000203844 806 ntBASIC12.27□□□□□ -0.45
Ccdc116Q80X53 Gm40466-201ENSMUST00000212174 422 ntBASIC12.27□□□□□ -0.45
Ccdc116Q80X53 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms