Protein–RNA interactions for Protein: Q80TP3

Ubr5, E3 ubiquitin-protein ligase UBR5, mousemouse

Predictions only

Length 2,792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr5Q80TP3 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC10.56□□□□□ -0.72
Ubr5Q80TP3 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ubr5Q80TP3 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC10.56□□□□□ -0.72
Ubr5Q80TP3 Gm7985-201ENSMUST00000183329 981 ntBASIC10.56□□□□□ -0.72
Ubr5Q80TP3 Gm19015-201ENSMUST00000184002 1189 ntBASIC10.56□□□□□ -0.72
Ubr5Q80TP3 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ubr5Q80TP3 Gm5700-201ENSMUST00000191483 989 ntBASIC10.56□□□□□ -0.72
Ubr5Q80TP3 Gm38151-201ENSMUST00000195085 289 ntBASIC10.56□□□□□ -0.72
Ubr5Q80TP3 Gm8956-201ENSMUST00000203939 825 ntBASIC10.56□□□□□ -0.72
Ubr5Q80TP3 Gm29763-201ENSMUST00000205306 616 ntBASIC10.56□□□□□ -0.72
Ubr5Q80TP3 Gm6108-201ENSMUST00000208365 367 ntBASIC10.56□□□□□ -0.72
Ubr5Q80TP3 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ubr5Q80TP3 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ubr5Q80TP3 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ubr5Q80TP3 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Ubr5Q80TP3 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Ubr5Q80TP3 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC10.56□□□□□ -0.72
Ubr5Q80TP3 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Ubr5Q80TP3 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ubr5Q80TP3 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ubr5Q80TP3 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Ubr5Q80TP3 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ubr5Q80TP3 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ubr5Q80TP3 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ubr5Q80TP3 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ubr5Q80TP3 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Ubr5Q80TP3 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Ubr5Q80TP3 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ubr5Q80TP3 Gm14807-201ENSMUST00000116640 983 ntBASIC10.55□□□□□ -0.72
Ubr5Q80TP3 Gm15207-201ENSMUST00000119259 442 ntBASIC10.55□□□□□ -0.72
Ubr5Q80TP3 Gm12036-201ENSMUST00000120008 530 ntBASIC10.55□□□□□ -0.72
Ubr5Q80TP3 Gm22846-201ENSMUST00000157706 270 ntBASIC10.55□□□□□ -0.72
Ubr5Q80TP3 Gm17796-201ENSMUST00000189015 1213 ntBASIC10.55□□□□□ -0.72
Ubr5Q80TP3 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC10.55□□□□□ -0.72
Ubr5Q80TP3 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ubr5Q80TP3 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ubr5Q80TP3 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC10.55□□□□□ -0.72
Ubr5Q80TP3 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ubr5Q80TP3 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ubr5Q80TP3 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Ubr5Q80TP3 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ubr5Q80TP3 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ubr5Q80TP3 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Ubr5Q80TP3 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ubr5Q80TP3 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Ubr5Q80TP3 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ubr5Q80TP3 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC10.55□□□□□ -0.72
Ubr5Q80TP3 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ubr5Q80TP3 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ubr5Q80TP3 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC10.55□□□□□ -0.72
Ubr5Q80TP3 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ubr5Q80TP3 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ubr5Q80TP3 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ubr5Q80TP3 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ubr5Q80TP3 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ubr5Q80TP3 Mir874-201ENSMUST00000104769 76 ntBASIC10.55□□□□□ -0.72
Ubr5Q80TP3 Gm11560-201ENSMUST00000117567 948 ntBASIC10.55□□□□□ -0.72
Ubr5Q80TP3 Gm13981-201ENSMUST00000122360 447 ntBASIC10.55□□□□□ -0.72
Ubr5Q80TP3 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC10.55□□□□□ -0.72
Ubr5Q80TP3 AC138716.2-201ENSMUST00000226670 1016 ntBASIC10.55□□□□□ -0.72
Ubr5Q80TP3 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Ubr5Q80TP3 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ubr5Q80TP3 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC10.55□□□□□ -0.72
Ubr5Q80TP3 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Ubr5Q80TP3 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC10.55□□□□□ -0.72
Ubr5Q80TP3 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ubr5Q80TP3 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ubr5Q80TP3 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ubr5Q80TP3 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ubr5Q80TP3 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ubr5Q80TP3 Acot6-202ENSMUST00000222921 3622 ntBASIC10.55□□□□□ -0.72
Ubr5Q80TP3 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ubr5Q80TP3 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ubr5Q80TP3 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC10.54□□□□□ -0.72
Ubr5Q80TP3 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ubr5Q80TP3 Gm14993-201ENSMUST00000121180 164 ntBASIC10.54□□□□□ -0.72
Ubr5Q80TP3 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ubr5Q80TP3 Gm12906-201ENSMUST00000154610 441 ntBASIC10.54□□□□□ -0.72
Ubr5Q80TP3 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Ubr5Q80TP3 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC10.54□□□□□ -0.72
Ubr5Q80TP3 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
Ubr5Q80TP3 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Ubr5Q80TP3 Gm37131-201ENSMUST00000192502 1561 ntBASIC10.54□□□□□ -0.72
Ubr5Q80TP3 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ubr5Q80TP3 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC10.54□□□□□ -0.72
Ubr5Q80TP3 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC10.54□□□□□ -0.72
Ubr5Q80TP3 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC10.54□□□□□ -0.72
Ubr5Q80TP3 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC10.54□□□□□ -0.72
Ubr5Q80TP3 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ubr5Q80TP3 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ubr5Q80TP3 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ubr5Q80TP3 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ubr5Q80TP3 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ubr5Q80TP3 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC10.54□□□□□ -0.72
Ubr5Q80TP3 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ubr5Q80TP3 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ubr5Q80TP3 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ubr5Q80TP3 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ubr5Q80TP3 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ubr5Q80TP3 Gm14395-201ENSMUST00000120494 563 ntBASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms