Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Pcdh8Q7TSK3 Gm12058-201ENSMUST00000118614 437 ntBASIC12.4□□□□□ -0.42
Pcdh8Q7TSK3 Gm13875-201ENSMUST00000120162 282 ntBASIC12.4□□□□□ -0.42
Pcdh8Q7TSK3 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.4□□□□□ -0.42
Pcdh8Q7TSK3 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh8Q7TSK3 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.4□□□□□ -0.42
Pcdh8Q7TSK3 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.4□□□□□ -0.42
Pcdh8Q7TSK3 Gm25890-201ENSMUST00000177643 165 ntBASIC12.4□□□□□ -0.42
Pcdh8Q7TSK3 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.4□□□□□ -0.42
Pcdh8Q7TSK3 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.4□□□□□ -0.42
Pcdh8Q7TSK3 Gm22614-201ENSMUST00000178300 165 ntBASIC12.4□□□□□ -0.42
Pcdh8Q7TSK3 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh8Q7TSK3 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC12.4□□□□□ -0.42
Pcdh8Q7TSK3 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.4□□□□□ -0.42
Pcdh8Q7TSK3 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh8Q7TSK3 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh8Q7TSK3 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh8Q7TSK3 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh8Q7TSK3 Gm22042-201ENSMUST00000082989 165 ntBASIC12.4□□□□□ -0.42
Pcdh8Q7TSK3 Gm26232-201ENSMUST00000083360 166 ntBASIC12.4□□□□□ -0.42
Pcdh8Q7TSK3 Gm24136-201ENSMUST00000083374 165 ntBASIC12.4□□□□□ -0.42
Pcdh8Q7TSK3 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.4□□□□□ -0.42
Pcdh8Q7TSK3 Gm26110-201ENSMUST00000083971 165 ntBASIC12.4□□□□□ -0.42
Pcdh8Q7TSK3 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh8Q7TSK3 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh8Q7TSK3 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.4□□□□□ -0.42
Pcdh8Q7TSK3 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh8Q7TSK3 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh8Q7TSK3 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh8Q7TSK3 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh8Q7TSK3 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh8Q7TSK3 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh8Q7TSK3 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdh8Q7TSK3 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Pcdh8Q7TSK3 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.4□□□□□ -0.43
Pcdh8Q7TSK3 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pcdh8Q7TSK3 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Pcdh8Q7TSK3 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.39□□□□□ -0.43
Pcdh8Q7TSK3 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh8Q7TSK3 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh8Q7TSK3 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh8Q7TSK3 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh8Q7TSK3 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.39□□□□□ -0.43
Pcdh8Q7TSK3 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh8Q7TSK3 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh8Q7TSK3 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh8Q7TSK3 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh8Q7TSK3 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh8Q7TSK3 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh8Q7TSK3 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh8Q7TSK3 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh8Q7TSK3 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh8Q7TSK3 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.39□□□□□ -0.43
Pcdh8Q7TSK3 Gm25214-201ENSMUST00000104573 129 ntBASIC12.39□□□□□ -0.43
Pcdh8Q7TSK3 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh8Q7TSK3 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.39□□□□□ -0.43
Pcdh8Q7TSK3 Gm15547-201ENSMUST00000122152 333 ntBASIC12.39□□□□□ -0.43
Pcdh8Q7TSK3 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Pcdh8Q7TSK3 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Pcdh8Q7TSK3 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Pcdh8Q7TSK3 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh8Q7TSK3 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.39□□□□□ -0.43
Pcdh8Q7TSK3 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.39□□□□□ -0.43
Pcdh8Q7TSK3 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh8Q7TSK3 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Pcdh8Q7TSK3 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.39□□□□□ -0.43
Pcdh8Q7TSK3 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.39□□□□□ -0.43
Pcdh8Q7TSK3 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.39□□□□□ -0.43
Pcdh8Q7TSK3 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.39□□□□□ -0.43
Pcdh8Q7TSK3 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.39□□□□□ -0.43
Pcdh8Q7TSK3 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.39□□□□□ -0.43
Pcdh8Q7TSK3 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Pcdh8Q7TSK3 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh8Q7TSK3 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Pcdh8Q7TSK3 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh8Q7TSK3 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh8Q7TSK3 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh8Q7TSK3 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh8Q7TSK3 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Pcdh8Q7TSK3 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.39□□□□□ -0.43
Pcdh8Q7TSK3 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh8Q7TSK3 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh8Q7TSK3 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh8Q7TSK3 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh8Q7TSK3 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Pcdh8Q7TSK3 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.38□□□□□ -0.43
Pcdh8Q7TSK3 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh8Q7TSK3 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh8Q7TSK3 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh8Q7TSK3 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Pcdh8Q7TSK3 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.38□□□□□ -0.43
Pcdh8Q7TSK3 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh8Q7TSK3 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh8Q7TSK3 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.38□□□□□ -0.43
Pcdh8Q7TSK3 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Pcdh8Q7TSK3 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh8Q7TSK3 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh8Q7TSK3 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Pcdh8Q7TSK3 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.38□□□□□ -0.43
Pcdh8Q7TSK3 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms