Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ctdp1Q7TSG2 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ctdp1Q7TSG2 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctdp1Q7TSG2 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ctdp1Q7TSG2 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctdp1Q7TSG2 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Ctdp1Q7TSG2 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctdp1Q7TSG2 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ctdp1Q7TSG2 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.67□□□□□ -0.22
Ctdp1Q7TSG2 AC157950.1-201ENSMUST00000217561 2168 ntBASIC13.67□□□□□ -0.22
Ctdp1Q7TSG2 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctdp1Q7TSG2 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ctdp1Q7TSG2 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctdp1Q7TSG2 Gm6244-201ENSMUST00000178732 841 ntBASIC13.67□□□□□ -0.22
Ctdp1Q7TSG2 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.67□□□□□ -0.22
Ctdp1Q7TSG2 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ctdp1Q7TSG2 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.67□□□□□ -0.22
Ctdp1Q7TSG2 Gm7287-201ENSMUST00000205267 602 ntBASIC13.67□□□□□ -0.22
Ctdp1Q7TSG2 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.67□□□□□ -0.22
Ctdp1Q7TSG2 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ctdp1Q7TSG2 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctdp1Q7TSG2 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ctdp1Q7TSG2 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctdp1Q7TSG2 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctdp1Q7TSG2 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctdp1Q7TSG2 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctdp1Q7TSG2 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctdp1Q7TSG2 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctdp1Q7TSG2 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ctdp1Q7TSG2 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctdp1Q7TSG2 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctdp1Q7TSG2 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctdp1Q7TSG2 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ctdp1Q7TSG2 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctdp1Q7TSG2 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.66□□□□□ -0.22
Ctdp1Q7TSG2 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ctdp1Q7TSG2 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Ctdp1Q7TSG2 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ctdp1Q7TSG2 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.66□□□□□ -0.22
Ctdp1Q7TSG2 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Ctdp1Q7TSG2 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC13.66□□□□□ -0.22
Ctdp1Q7TSG2 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.66□□□□□ -0.22
Ctdp1Q7TSG2 Gm16202-201ENSMUST00000117532 544 ntBASIC13.66□□□□□ -0.22
Ctdp1Q7TSG2 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ctdp1Q7TSG2 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.66□□□□□ -0.22
Ctdp1Q7TSG2 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctdp1Q7TSG2 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.66□□□□□ -0.22
Ctdp1Q7TSG2 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctdp1Q7TSG2 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ctdp1Q7TSG2 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctdp1Q7TSG2 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctdp1Q7TSG2 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctdp1Q7TSG2 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ctdp1Q7TSG2 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctdp1Q7TSG2 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctdp1Q7TSG2 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctdp1Q7TSG2 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ctdp1Q7TSG2 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctdp1Q7TSG2 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctdp1Q7TSG2 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctdp1Q7TSG2 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctdp1Q7TSG2 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ctdp1Q7TSG2 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctdp1Q7TSG2 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctdp1Q7TSG2 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctdp1Q7TSG2 Map1b-203ENSMUST00000223725 2669 ntBASIC13.66□□□□□ -0.22
Ctdp1Q7TSG2 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctdp1Q7TSG2 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ctdp1Q7TSG2 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctdp1Q7TSG2 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.66□□□□□ -0.22
Ctdp1Q7TSG2 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctdp1Q7TSG2 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctdp1Q7TSG2 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Ctdp1Q7TSG2 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.65□□□□□ -0.22
Ctdp1Q7TSG2 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctdp1Q7TSG2 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctdp1Q7TSG2 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ctdp1Q7TSG2 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctdp1Q7TSG2 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctdp1Q7TSG2 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctdp1Q7TSG2 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctdp1Q7TSG2 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctdp1Q7TSG2 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.65□□□□□ -0.22
Ctdp1Q7TSG2 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.65□□□□□ -0.22
Ctdp1Q7TSG2 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctdp1Q7TSG2 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.65□□□□□ -0.22
Ctdp1Q7TSG2 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ctdp1Q7TSG2 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctdp1Q7TSG2 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Ctdp1Q7TSG2 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Ctdp1Q7TSG2 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.65□□□□□ -0.22
Ctdp1Q7TSG2 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.65□□□□□ -0.22
Ctdp1Q7TSG2 Gm5035-201ENSMUST00000215581 927 ntBASIC13.65□□□□□ -0.22
Ctdp1Q7TSG2 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctdp1Q7TSG2 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctdp1Q7TSG2 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctdp1Q7TSG2 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctdp1Q7TSG2 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ctdp1Q7TSG2 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctdp1Q7TSG2 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms