Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ubfd1Q78JW9 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ubfd1Q78JW9 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.24□□□□□ -0.45
Ubfd1Q78JW9 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ubfd1Q78JW9 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ubfd1Q78JW9 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.23□□□□□ -0.45
Ubfd1Q78JW9 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ubfd1Q78JW9 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Ubfd1Q78JW9 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ubfd1Q78JW9 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ubfd1Q78JW9 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ubfd1Q78JW9 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ubfd1Q78JW9 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ubfd1Q78JW9 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ubfd1Q78JW9 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ubfd1Q78JW9 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ubfd1Q78JW9 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ubfd1Q78JW9 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.23□□□□□ -0.45
Ubfd1Q78JW9 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ubfd1Q78JW9 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ubfd1Q78JW9 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ubfd1Q78JW9 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ubfd1Q78JW9 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ubfd1Q78JW9 Gm12015-201ENSMUST00000117065 843 ntBASIC12.23□□□□□ -0.45
Ubfd1Q78JW9 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.23□□□□□ -0.45
Ubfd1Q78JW9 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ubfd1Q78JW9 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ubfd1Q78JW9 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ubfd1Q78JW9 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ubfd1Q78JW9 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.23□□□□□ -0.45
Ubfd1Q78JW9 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ubfd1Q78JW9 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.23□□□□□ -0.45
Ubfd1Q78JW9 Gm18304-201ENSMUST00000189162 546 ntBASIC12.23□□□□□ -0.45
Ubfd1Q78JW9 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.23□□□□□ -0.45
Ubfd1Q78JW9 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.23□□□□□ -0.45
Ubfd1Q78JW9 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.23□□□□□ -0.45
Ubfd1Q78JW9 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.23□□□□□ -0.45
Ubfd1Q78JW9 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Ubfd1Q78JW9 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.23□□□□□ -0.45
Ubfd1Q78JW9 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.23□□□□□ -0.45
Ubfd1Q78JW9 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Ubfd1Q78JW9 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ubfd1Q78JW9 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ubfd1Q78JW9 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.23□□□□□ -0.45
Ubfd1Q78JW9 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ubfd1Q78JW9 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ubfd1Q78JW9 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ubfd1Q78JW9 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.23□□□□□ -0.45
Ubfd1Q78JW9 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ubfd1Q78JW9 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.23□□□□□ -0.45
Ubfd1Q78JW9 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ubfd1Q78JW9 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ubfd1Q78JW9 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ubfd1Q78JW9 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ubfd1Q78JW9 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ubfd1Q78JW9 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ubfd1Q78JW9 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.22□□□□□ -0.45
Ubfd1Q78JW9 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ubfd1Q78JW9 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ubfd1Q78JW9 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ubfd1Q78JW9 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ubfd1Q78JW9 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ubfd1Q78JW9 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Ubfd1Q78JW9 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ubfd1Q78JW9 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ubfd1Q78JW9 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ubfd1Q78JW9 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ubfd1Q78JW9 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ubfd1Q78JW9 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Ubfd1Q78JW9 Gm12997-201ENSMUST00000120207 640 ntBASIC12.22□□□□□ -0.45
Ubfd1Q78JW9 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ubfd1Q78JW9 Gm16570-201ENSMUST00000161951 436 ntBASIC12.22□□□□□ -0.45
Ubfd1Q78JW9 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.22□□□□□ -0.45
Ubfd1Q78JW9 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.22□□□□□ -0.45
Ubfd1Q78JW9 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ubfd1Q78JW9 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ubfd1Q78JW9 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.22□□□□□ -0.45
Ubfd1Q78JW9 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ubfd1Q78JW9 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ubfd1Q78JW9 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ubfd1Q78JW9 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ubfd1Q78JW9 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ubfd1Q78JW9 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.22□□□□□ -0.45
Ubfd1Q78JW9 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ubfd1Q78JW9 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.22□□□□□ -0.45
Ubfd1Q78JW9 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Ubfd1Q78JW9 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ubfd1Q78JW9 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.22□□□□□ -0.45
Ubfd1Q78JW9 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ubfd1Q78JW9 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Ubfd1Q78JW9 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ubfd1Q78JW9 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ubfd1Q78JW9 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ubfd1Q78JW9 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ubfd1Q78JW9 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ubfd1Q78JW9 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ubfd1Q78JW9 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ubfd1Q78JW9 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ubfd1Q78JW9 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ubfd1Q78JW9 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms