Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx55Q6ZPL9 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx55Q6ZPL9 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx55Q6ZPL9 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC14.22□□□□□ -0.13
Ddx55Q6ZPL9 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Ddx55Q6ZPL9 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx55Q6ZPL9 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx55Q6ZPL9 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx55Q6ZPL9 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx55Q6ZPL9 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx55Q6ZPL9 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Ddx55Q6ZPL9 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Ddx55Q6ZPL9 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx55Q6ZPL9 AC091458.1-201ENSMUST00000220902 1361 ntBASIC14.22□□□□□ -0.13
Ddx55Q6ZPL9 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx55Q6ZPL9 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.21□□□□□ -0.13
Ddx55Q6ZPL9 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx55Q6ZPL9 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Ddx55Q6ZPL9 Gm9072-201ENSMUST00000218390 1514 ntBASIC14.21□□□□□ -0.13
Ddx55Q6ZPL9 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx55Q6ZPL9 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx55Q6ZPL9 Gm21998-201ENSMUST00000117552 1308 ntBASIC14.21□□□□□ -0.13
Ddx55Q6ZPL9 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx55Q6ZPL9 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx55Q6ZPL9 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC14.21□□□□□ -0.13
Ddx55Q6ZPL9 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx55Q6ZPL9 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Ddx55Q6ZPL9 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx55Q6ZPL9 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Ddx55Q6ZPL9 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Ddx55Q6ZPL9 Gm15573-201ENSMUST00000119487 540 ntBASIC14.21□□□□□ -0.13
Ddx55Q6ZPL9 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC14.21□□□□□ -0.13
Ddx55Q6ZPL9 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Ddx55Q6ZPL9 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC14.21□□□□□ -0.13
Ddx55Q6ZPL9 Ighv1-48-201ENSMUST00000191795 294 ntBASIC14.21□□□□□ -0.13
Ddx55Q6ZPL9 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx55Q6ZPL9 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx55Q6ZPL9 Gm9132-201ENSMUST00000210182 832 ntBASIC14.21□□□□□ -0.13
Ddx55Q6ZPL9 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC14.21□□□□□ -0.13
Ddx55Q6ZPL9 Gm45909-201ENSMUST00000212413 1031 ntBASIC14.21□□□□□ -0.13
Ddx55Q6ZPL9 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC14.21□□□□□ -0.13
Ddx55Q6ZPL9 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx55Q6ZPL9 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx55Q6ZPL9 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Ddx55Q6ZPL9 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ddx55Q6ZPL9 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Ddx55Q6ZPL9 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Ddx55Q6ZPL9 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Ddx55Q6ZPL9 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx55Q6ZPL9 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx55Q6ZPL9 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx55Q6ZPL9 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx55Q6ZPL9 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx55Q6ZPL9 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx55Q6ZPL9 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx55Q6ZPL9 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Ddx55Q6ZPL9 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx55Q6ZPL9 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx55Q6ZPL9 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx55Q6ZPL9 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx55Q6ZPL9 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx55Q6ZPL9 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx55Q6ZPL9 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx55Q6ZPL9 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC14.2□□□□□ -0.14
Ddx55Q6ZPL9 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx55Q6ZPL9 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Ddx55Q6ZPL9 Gm26286-201ENSMUST00000104166 134 ntBASIC14.2□□□□□ -0.14
Ddx55Q6ZPL9 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC14.2□□□□□ -0.14
Ddx55Q6ZPL9 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx55Q6ZPL9 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC14.2□□□□□ -0.14
Ddx55Q6ZPL9 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC14.2□□□□□ -0.14
Ddx55Q6ZPL9 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Ddx55Q6ZPL9 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx55Q6ZPL9 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx55Q6ZPL9 Gm4607-201ENSMUST00000206649 577 ntBASIC14.2□□□□□ -0.14
Ddx55Q6ZPL9 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx55Q6ZPL9 AC132901.1-201ENSMUST00000224345 508 ntBASIC14.2□□□□□ -0.14
Ddx55Q6ZPL9 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx55Q6ZPL9 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx55Q6ZPL9 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx55Q6ZPL9 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx55Q6ZPL9 Gm10288-201ENSMUST00000084614 537 ntBASIC14.2□□□□□ -0.14
Ddx55Q6ZPL9 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ddx55Q6ZPL9 AC171277.1-201ENSMUST00000216902 1441 ntBASIC14.2□□□□□ -0.14
Ddx55Q6ZPL9 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ddx55Q6ZPL9 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx55Q6ZPL9 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx55Q6ZPL9 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.2□□□□□ -0.14
Ddx55Q6ZPL9 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.2□□□□□ -0.14
Ddx55Q6ZPL9 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx55Q6ZPL9 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx55Q6ZPL9 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.2□□□□□ -0.14
Ddx55Q6ZPL9 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx55Q6ZPL9 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ddx55Q6ZPL9 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx55Q6ZPL9 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.2□□□□□ -0.14
Ddx55Q6ZPL9 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ddx55Q6ZPL9 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx55Q6ZPL9 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Ddx55Q6ZPL9 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms