Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.35□□□□□ -0.43
Scaf4Q6PFF0 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Scaf4Q6PFF0 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Scaf4Q6PFF0 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.35□□□□□ -0.43
Scaf4Q6PFF0 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Scaf4Q6PFF0 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scaf4Q6PFF0 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Scaf4Q6PFF0 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scaf4Q6PFF0 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Scaf4Q6PFF0 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scaf4Q6PFF0 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scaf4Q6PFF0 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scaf4Q6PFF0 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scaf4Q6PFF0 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scaf4Q6PFF0 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Scaf4Q6PFF0 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scaf4Q6PFF0 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.34□□□□□ -0.43
Scaf4Q6PFF0 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Scaf4Q6PFF0 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Scaf4Q6PFF0 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scaf4Q6PFF0 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scaf4Q6PFF0 Snord83b-201ENSMUST00000104546 94 ntBASIC12.34□□□□□ -0.43
Scaf4Q6PFF0 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.34□□□□□ -0.43
Scaf4Q6PFF0 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.34□□□□□ -0.43
Scaf4Q6PFF0 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Scaf4Q6PFF0 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.34□□□□□ -0.43
Scaf4Q6PFF0 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.34□□□□□ -0.43
Scaf4Q6PFF0 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Scaf4Q6PFF0 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Scaf4Q6PFF0 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.34□□□□□ -0.43
Scaf4Q6PFF0 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scaf4Q6PFF0 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.34□□□□□ -0.43
Scaf4Q6PFF0 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scaf4Q6PFF0 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scaf4Q6PFF0 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Scaf4Q6PFF0 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scaf4Q6PFF0 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scaf4Q6PFF0 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.34□□□□□ -0.43
Scaf4Q6PFF0 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Scaf4Q6PFF0 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Scaf4Q6PFF0 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.34□□□□□ -0.43
Scaf4Q6PFF0 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.34□□□□□ -0.43
Scaf4Q6PFF0 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.34□□□□□ -0.43
Scaf4Q6PFF0 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scaf4Q6PFF0 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Scaf4Q6PFF0 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Scaf4Q6PFF0 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scaf4Q6PFF0 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scaf4Q6PFF0 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scaf4Q6PFF0 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Scaf4Q6PFF0 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Scaf4Q6PFF0 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Gm12928-201ENSMUST00000117115 573 ntBASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Mir6392-201ENSMUST00000184924 108 ntBASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Gm44855-201ENSMUST00000205725 362 ntBASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Gm18624-201ENSMUST00000220966 658 ntBASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scaf4Q6PFF0 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms