Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Chd4Q6PDQ2 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Chd4Q6PDQ2 Gm24844-201ENSMUST00000158679 127 ntBASIC16.07■□□□□ 0.16
Chd4Q6PDQ2 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd4Q6PDQ2 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd4Q6PDQ2 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC16.07■□□□□ 0.16
Chd4Q6PDQ2 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd4Q6PDQ2 Gm37437-201ENSMUST00000194451 1937 ntBASIC16.07■□□□□ 0.16
Chd4Q6PDQ2 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd4Q6PDQ2 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd4Q6PDQ2 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Chd4Q6PDQ2 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Chd4Q6PDQ2 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC16.07■□□□□ 0.16
Chd4Q6PDQ2 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd4Q6PDQ2 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd4Q6PDQ2 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd4Q6PDQ2 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd4Q6PDQ2 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
Chd4Q6PDQ2 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Chd4Q6PDQ2 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC16.07■□□□□ 0.16
Chd4Q6PDQ2 Gm43186-201ENSMUST00000198130 824 ntBASIC16.07■□□□□ 0.16
Chd4Q6PDQ2 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Chd4Q6PDQ2 CT485607.1-201ENSMUST00000216100 85 ntBASIC16.07■□□□□ 0.16
Chd4Q6PDQ2 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd4Q6PDQ2 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd4Q6PDQ2 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC16.07■□□□□ 0.16
Chd4Q6PDQ2 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC16.07■□□□□ 0.16
Chd4Q6PDQ2 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Chd4Q6PDQ2 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Chd4Q6PDQ2 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.07■□□□□ 0.16
Chd4Q6PDQ2 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd4Q6PDQ2 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC16.07■□□□□ 0.16
Chd4Q6PDQ2 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd4Q6PDQ2 AC129931.1-201ENSMUST00000228865 1861 ntBASIC16.07■□□□□ 0.16
Chd4Q6PDQ2 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Chd4Q6PDQ2 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd4Q6PDQ2 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd4Q6PDQ2 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Chd4Q6PDQ2 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd4Q6PDQ2 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC16.06■□□□□ 0.16
Chd4Q6PDQ2 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd4Q6PDQ2 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd4Q6PDQ2 Gm13916-201ENSMUST00000117368 628 ntBASIC16.06■□□□□ 0.16
Chd4Q6PDQ2 Gm11246-201ENSMUST00000120880 345 ntBASIC16.06■□□□□ 0.16
Chd4Q6PDQ2 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC16.06■□□□□ 0.16
Chd4Q6PDQ2 Mir1956-201ENSMUST00000157748 65 ntBASIC16.06■□□□□ 0.16
Chd4Q6PDQ2 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd4Q6PDQ2 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC16.06■□□□□ 0.16
Chd4Q6PDQ2 Gm2517-201ENSMUST00000215651 348 ntBASIC16.06■□□□□ 0.16
Chd4Q6PDQ2 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Chd4Q6PDQ2 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Chd4Q6PDQ2 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd4Q6PDQ2 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd4Q6PDQ2 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Chd4Q6PDQ2 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd4Q6PDQ2 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd4Q6PDQ2 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd4Q6PDQ2 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Chd4Q6PDQ2 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd4Q6PDQ2 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Chd4Q6PDQ2 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd4Q6PDQ2 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd4Q6PDQ2 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd4Q6PDQ2 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd4Q6PDQ2 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd4Q6PDQ2 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd4Q6PDQ2 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd4Q6PDQ2 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Chd4Q6PDQ2 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd4Q6PDQ2 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd4Q6PDQ2 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Chd4Q6PDQ2 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC16.06■□□□□ 0.16
Chd4Q6PDQ2 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC16.06■□□□□ 0.16
Chd4Q6PDQ2 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd4Q6PDQ2 Ighv1-48-201ENSMUST00000191795 294 ntBASIC16.06■□□□□ 0.16
Chd4Q6PDQ2 Gm38210-201ENSMUST00000191944 809 ntBASIC16.06■□□□□ 0.16
Chd4Q6PDQ2 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC16.05■□□□□ 0.16
Chd4Q6PDQ2 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chd4Q6PDQ2 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chd4Q6PDQ2 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chd4Q6PDQ2 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Chd4Q6PDQ2 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chd4Q6PDQ2 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Chd4Q6PDQ2 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chd4Q6PDQ2 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chd4Q6PDQ2 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
Chd4Q6PDQ2 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chd4Q6PDQ2 Acot6-202ENSMUST00000222921 3622 ntBASIC16.05■□□□□ 0.16
Chd4Q6PDQ2 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC16.05■□□□□ 0.16
Chd4Q6PDQ2 Gm7666-201ENSMUST00000146631 819 ntBASIC16.05■□□□□ 0.16
Chd4Q6PDQ2 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC16.05■□□□□ 0.16
Chd4Q6PDQ2 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC16.05■□□□□ 0.16
Chd4Q6PDQ2 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chd4Q6PDQ2 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC16.05■□□□□ 0.16
Chd4Q6PDQ2 Gm9463-201ENSMUST00000206707 601 ntBASIC16.05■□□□□ 0.16
Chd4Q6PDQ2 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC16.05■□□□□ 0.16
Chd4Q6PDQ2 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chd4Q6PDQ2 Gm9387-201ENSMUST00000098624 1320 ntBASIC16.05■□□□□ 0.16
Chd4Q6PDQ2 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Chd4Q6PDQ2 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms