Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ShbQ6PD21 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
ShbQ6PD21 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
ShbQ6PD21 Gm14274-201ENSMUST00000117182 615 ntBASIC13.38□□□□□ -0.27
ShbQ6PD21 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
ShbQ6PD21 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC13.38□□□□□ -0.27
ShbQ6PD21 Gm15004-201ENSMUST00000119192 630 ntBASIC13.38□□□□□ -0.27
ShbQ6PD21 Gm11979-201ENSMUST00000119629 743 ntBASIC13.38□□□□□ -0.27
ShbQ6PD21 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ShbQ6PD21 Gm14760-201ENSMUST00000121831 999 ntBASIC13.38□□□□□ -0.27
ShbQ6PD21 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC13.38□□□□□ -0.27
ShbQ6PD21 Gm19891-201ENSMUST00000189771 303 ntBASIC13.38□□□□□ -0.27
ShbQ6PD21 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ShbQ6PD21 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ShbQ6PD21 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
ShbQ6PD21 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
ShbQ6PD21 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ShbQ6PD21 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ShbQ6PD21 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ShbQ6PD21 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ShbQ6PD21 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
ShbQ6PD21 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ShbQ6PD21 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
ShbQ6PD21 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.38□□□□□ -0.27
ShbQ6PD21 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ShbQ6PD21 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ShbQ6PD21 CT009489.1-201ENSMUST00000227740 1893 ntBASIC13.38□□□□□ -0.27
ShbQ6PD21 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ShbQ6PD21 Gm42941-201ENSMUST00000200347 1321 ntBASIC13.38□□□□□ -0.27
ShbQ6PD21 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
ShbQ6PD21 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ShbQ6PD21 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ShbQ6PD21 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ShbQ6PD21 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ShbQ6PD21 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ShbQ6PD21 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC13.37□□□□□ -0.27
ShbQ6PD21 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC13.37□□□□□ -0.27
ShbQ6PD21 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ShbQ6PD21 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ShbQ6PD21 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
ShbQ6PD21 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ShbQ6PD21 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC13.37□□□□□ -0.27
ShbQ6PD21 Gm26134-201ENSMUST00000178484 110 ntBASIC13.37□□□□□ -0.27
ShbQ6PD21 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ShbQ6PD21 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC13.37□□□□□ -0.27
ShbQ6PD21 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC13.37□□□□□ -0.27
ShbQ6PD21 Gm3017-201ENSMUST00000203603 1126 ntBASIC13.37□□□□□ -0.27
ShbQ6PD21 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
ShbQ6PD21 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ShbQ6PD21 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ShbQ6PD21 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ShbQ6PD21 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ShbQ6PD21 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC13.37□□□□□ -0.27
ShbQ6PD21 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC13.37□□□□□ -0.27
ShbQ6PD21 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
ShbQ6PD21 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ShbQ6PD21 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ShbQ6PD21 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ShbQ6PD21 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
ShbQ6PD21 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ShbQ6PD21 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ShbQ6PD21 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ShbQ6PD21 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.37□□□□□ -0.27
ShbQ6PD21 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ShbQ6PD21 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ShbQ6PD21 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
ShbQ6PD21 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ShbQ6PD21 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ShbQ6PD21 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ShbQ6PD21 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ShbQ6PD21 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ShbQ6PD21 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ShbQ6PD21 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC13.36□□□□□ -0.27
ShbQ6PD21 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ShbQ6PD21 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ShbQ6PD21 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ShbQ6PD21 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ShbQ6PD21 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
ShbQ6PD21 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ShbQ6PD21 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ShbQ6PD21 Gm12419-201ENSMUST00000116649 636 ntBASIC13.36□□□□□ -0.27
ShbQ6PD21 Gm15207-201ENSMUST00000119259 442 ntBASIC13.36□□□□□ -0.27
ShbQ6PD21 Gm12030-201ENSMUST00000121917 223 ntBASIC13.36□□□□□ -0.27
ShbQ6PD21 Gm8723-201ENSMUST00000166076 820 ntBASIC13.36□□□□□ -0.27
ShbQ6PD21 Gm8701-201ENSMUST00000169259 874 ntBASIC13.36□□□□□ -0.27
ShbQ6PD21 Gm18201-201ENSMUST00000174735 875 ntBASIC13.36□□□□□ -0.27
ShbQ6PD21 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
ShbQ6PD21 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ShbQ6PD21 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC13.36□□□□□ -0.27
ShbQ6PD21 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
ShbQ6PD21 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
ShbQ6PD21 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ShbQ6PD21 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
ShbQ6PD21 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ShbQ6PD21 Gm44056-201ENSMUST00000204623 1427 ntBASIC13.36□□□□□ -0.27
ShbQ6PD21 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.36□□□□□ -0.27
ShbQ6PD21 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
ShbQ6PD21 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
ShbQ6PD21 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ShbQ6PD21 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms